RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 INTS7Q9NVH2 962 aaKnown RBP8.71□□□□□ -1.01
CLK4-202ENST00000519132 PUF60Q9UHX1 559 aaKnown RBP8.71□□□□□ -1.01
CLK4-202ENST00000519132 DYRK1BQ9Y463 629 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 PCDHGC4Q9Y5F7 938 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 TCRBV16S1A1N1A0A5B0 115 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 TBX3O15119 743 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 SHOXO15266 292 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 GHRHP01286 108 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 LRRFIP1Q32MZ4 808 aaKnown RBP8.71□□□□□ -1.01
CLK4-202ENST00000519132 IQSEC1Q6DN90 963 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 DENND5AQ6IQ26 1287 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.01
CLK4-202ENST00000519132 ZNF598Q86UK7 904 aaKnown RBP8.71□□□□□ -1.01
CLK4-202ENST00000519132 ZFYVE1Q9HBF4 777 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 LUZP4Q9P127 313 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 MINPP1Q9UNW1 487 aa8.71□□□□□ -1.01
CLK4-202ENST00000519132 POLR3AO14802 1390 aaPredicted RBP8.71□□□□□ -1.02
CLK4-202ENST00000519132 LRRC7Q96NW7 1537 aa8.71□□□□□ -1.02
CLK4-202ENST00000519132 USP54Q70EL1 1684 aa8.71□□□□□ -1.02
CLK4-202ENST00000519132 GLRX3O76003 335 aaKnown RBP8.71□□□□□ -1.02
CLK4-202ENST00000519132 ECE1P42892 770 aa8.71□□□□□ -1.02
CLK4-202ENST00000519132 CTBSQ01459 385 aa8.71□□□□□ -1.02
CLK4-202ENST00000519132 BAHD1Q8TBE0 780 aaPredicted RBP8.71□□□□□ -1.02
CLK4-202ENST00000519132 APOL5Q9BWW9 433 aa8.71□□□□□ -1.02
CLK4-202ENST00000519132 UBE2OQ9C0C9 1292 aaKnown RBP8.71□□□□□ -1.02
CLK4-202ENST00000519132 KLHL25Q9H0H3 589 aa8.71□□□□□ -1.02
CLK4-202ENST00000519132 FBXO9Q9UK97 447 aaPredicted RBP8.71□□□□□ -1.02
CLK4-202ENST00000519132 EDC4Q6P2E9 1401 aaKnown RBP8.71□□□□□ -1.02
CLK4-202ENST00000519132 RASSF10A6NK89 507 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 SRGNP10124 158 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 TRIM27P14373 513 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 MAOBP27338 520 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 GSTCDQ8NEC7 633 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 SCYL1Q96KG9 808 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 MRPL4Q9BYD3 311 aaKnown RBP8.7□□□□□ -1.02
CLK4-202ENST00000519132 CACNA2D2Q9NY47 1150 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 AGRPO00253 132 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 CAPNS1P04632 268 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
CLK4-202ENST00000519132 CDCA2Q69YH5 1023 aaPredicted RBP8.7□□□□□ -1.02
CLK4-202ENST00000519132 ELMO3Q96BJ8 720 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 FUBP3Q96I24 572 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLK4-202ENST00000519132 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
CLK4-202ENST00000519132 NRSN2Q9GZP1 204 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 SMOC1Q9H4F8 434 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 C19orf44Q9H6X5 657 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 IFT22Q9H7X7 185 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 C14orf119Q9NWQ9 140 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 ZNF451Q9Y4E5 1061 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 PCDHA8Q9Y5H6 950 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 TMEM94Q12767 1356 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 CGNL1Q0VF96 1302 aa8.7□□□□□ -1.02
CLK4-202ENST00000519132 MYBBP1AQ9BQG0 1328 aaKnown RBP8.7□□□□□ -1.02
CLK4-202ENST00000519132 TCERG1O14776 1098 aaKnown RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 FBXO21O94952 628 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 GRIK1P39086 918 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 MYBPC2Q14324 1141 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 OTUD6BQ8N6M0 293 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 PNISRQ8TF01 805 aaKnown RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 PDCL3Q9H2J4 239 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA12O60330 932 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 MAP3K6O95382 1288 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 NBPF9Q3BBW0 867 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 ARHGAP29Q52LW3 1261 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 HEATR6Q6AI08 1181 aaKnown RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 TJP2Q9UDY2 1190 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA9Q9Y5G4 932 aaKnown RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA8Q9Y5G5 932 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA7Q9Y5G6 932 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA6Q9Y5G7 932 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA3Q9Y5H0 932 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 PCDHGA2Q9Y5H1 932 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 SSH2Q76I76 1423 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 IL2P60568 153 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 ERVK-21P61565 698 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 LLGL1Q15334 1064 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 DHCR24Q15392 516 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 COL23A1Q86Y22 540 aaPredicted RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 IFNL3Q8IZI9 196 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 TAB3Q8N5C8 712 aaPredicted RBP8.69□□□□□ -1.02
CLK4-202ENST00000519132 ANKRD42Q8N9B4 389 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 TMEM145Q8NBT3 493 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 FAM13CQ8NE31 585 aa8.69□□□□□ -1.02
CLK4-202ENST00000519132 GOLGA6CA6NDK9 693 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 GOLGA6BA6NDN3 693 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 KCNH1O95259 989 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 GOLGA6DP0CG33 693 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 CYP4F3Q08477 520 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 SIM2Q14190 667 aaPredicted RBP8.68□□□□□ -1.02
CLK4-202ENST00000519132 SLC4A8Q2Y0W8 1093 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 HSP90AB3PQ58FF7 597 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 TRIM61Q5EBN2 209 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 PUS7LQ9H0K6 701 aaKnown RBP8.68□□□□□ -1.02
CLK4-202ENST00000519132 GOLGA6AQ9NYA3 693 aa8.68□□□□□ -1.02
CLK4-202ENST00000519132 DACH1Q9UI36 760 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms