RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DBN1Q16643 649 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ATP2B3Q16720 1220 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 WDR78Q5VTH9 848 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 TTLL5Q6EMB2 1281 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 SPOCD1Q6ZMY3 1216 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 LYSMD3Q7Z3D4 306 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 USP48Q86UV5 1035 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 AMOTL1Q8IY63 956 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 TRIM22Q8IYM9 498 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 ZNF654Q8IZM8 581 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 GPC2Q8N158 579 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 TTC16Q8NEE8 873 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 EXOC6Q8TAG9 804 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 SSH3Q8TE77 659 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 LPIN2Q92539 896 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 FAM126AQ9BYI3 521 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 CHRDQ9H2X0 955 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CD209Q9NNX6 404 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 CNTN3Q9P232 1028 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 NRBP1Q9UHY1 535 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 JAG2Q9Y219 1238 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 EXOC6BQ9Y2D4 811 aa3.32□□□□□ -1.88
SKP1-204ENST00000517691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.32□□□□□ -1.88
SKP1-204ENST00000517691 KIAA1551Q9HCM1 1747 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 IQCA1LA6NCM1 817 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 H7C1D1 291 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 ZNF500O60304 480 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 EPS15P42566 896 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 TYRO3Q06418 890 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 ARSJQ5FYB0 599 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 MEI1Q5TIA1 1274 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 TTC39BQ5VTQ0 682 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 ZNF438Q7Z4V0 828 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 ERC1Q8IUD2 1116 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 SIRT2Q8IXJ6 389 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 CKAP2LQ8IYA6 745 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 C1orf127Q8N9H9 656 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 PRPF38AQ8NAV1 312 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 SNX29Q8TEQ0 813 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 FAM84BQ96KN1 310 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 ARPC5LQ9BPX5 153 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 MXD3Q9BW11 206 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 ZCCHC2Q9C0B9 1178 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 GEMIN8Q9NWZ8 242 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 CNOT7Q9UIV1 285 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 HACL1Q9UJ83 578 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 FNDC3AQ9Y2H6 1198 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 PRKAB1Q9Y478 270 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 MED23Q9ULK4 1368 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 DDX60Q8IY21 1712 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 COL4A1P02462 1669 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 SNED1Q8TER0 1413 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 A0A1B0GTH6 734 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 A0A1B0GUL7 405 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 CFAP69A5D8W1 941 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 F8W031 263 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 GIPC1O14908 333 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 EREGO14944 169 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 SASH1O94885 1247 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 EGFRP00533 1210 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 VIL1P09327 827 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 IFIT2P09913 472 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 FGFR2P21802 821 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 ADORA1P30542 326 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 EPHX2P34913 555 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 MASP1P48740 699 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 RBM5P52756 815 aaKnown RBP eCLIP3.31□□□□□ -1.88
SKP1-204ENST00000517691 CHMP4BP1P59074 171 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 LRRC41Q15345 812 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 CCDC158Q5M9N0 1113 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 STRIP1Q5VSL9 837 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 NXPE4Q6UWF7 544 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 C15orf52Q6ZUT6 534 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 JAMLQ86YT9 394 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 GALNT12Q8IXK2 581 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 CLASRPQ8N2M8 674 aaKnown RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 VGLL2Q8N8G2 317 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 SH3TC2Q8TF17 1288 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 ZNF837Q96EG3 531 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 SENP7Q9BQF6 1050 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 CCDC8Q9H0W5 538 aaPredicted RBP3.31□□□□□ -1.88
SKP1-204ENST00000517691 IL1RAPL2Q9NP60 686 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 TIMMDC1Q9NPL8 285 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 GPRC5DQ9NZD1 345 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 KCNG1Q9UIX4 513 aa3.31□□□□□ -1.88
SKP1-204ENST00000517691 CACNA1FO60840 1977 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 ESYT3A0FGR9 886 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 SHTN1A0MZ66 631 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 CCDC85CA6NKD9 419 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 PHACTR2O75167 634 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 XYLBO75191 536 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 CDC45O75419 566 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 IL1R1P14778 569 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 AMPD1P23109 780 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 RPS12P25398 132 aaKnown RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 PHKA1P46020 1223 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 GJA8P48165 433 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 CDKN1CP49918 316 aaPredicted RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 PAK2Q13177 524 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 MYBPC2Q14324 1141 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms