RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SMC5Q8IY18 1101 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 STAG2Q8N3U4 1231 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SYTL5Q8TDW5 730 aaPredicted RBP9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 GPKOWQ92917 476 aaPredicted RBP eCLIP9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 AP5M1Q9H0R1 490 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SPC25Q9HBM1 224 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ZNF287Q9HBT7 754 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MROH7Q68CQ1 1323 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 PIEZO1Q92508 2521 aa9.76□□□□□ -0.85
SCARNA20.3-201ENST00000516913 GBF1Q92538 1859 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CABYRO75952 493 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CA3P07451 260 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 IQCF3P0C7M6 154 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SDSP20132 328 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 PDE4AP27815 886 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 KCNQ1P51787 676 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TAP1Q03518 808 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TRIM71Q2Q1W2 868 aaKnown RBP9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 USH1GQ495M9 461 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 GDF6Q6KF10 455 aaPredicted RBP9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 IL31RAQ8NI17 732 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 AFG1LQ8WV93 481 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ANKS1AQ92625 1134 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ASB2Q96Q27 587 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 JMJD4Q9H9V9 463 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MTCH2Q9Y6C9 303 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CCDC171Q6TFL3 1326 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MYO7AQ13402 2215 aa9.75□□□□□ -0.85
SCARNA20.3-201ENST00000516913 B4E1Z4 1266 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TLR3O15455 904 aaKnown RBP9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 NBNO60934 754 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 KDM4AO75164 1064 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SLC3A2P08195 630 aaKnown RBP9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 IGFBP4P22692 258 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SP2Q02086 613 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 RNF207Q6ZRF8 634 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CYB5R4Q7L1T6 521 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ADGRF4Q8IZF3 695 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ENAHQ8N8S7 591 aaPredicted RBP9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 OR6J1Q8NGC5 347 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MTG1Q9BT17 334 aaPredicted RBP9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CD320Q9NPF0 282 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TOMM22Q9NS69 142 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ZSWIM5Q9P217 1185 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SLC4A7Q9Y6M7 1214 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 WDR87Q6ZQQ6 2873 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ZMYM6O95789 1325 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MUC6Q6W4X9 2439 aa9.74□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TNFRSF10AO00220 468 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SORBS3O60504 671 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TXNP10599 105 aaKnown RBP9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ATP2A2P16615 1042 aaKnown RBP9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 DEFB103AP81534 67 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SEC23AQ15436 765 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 QRICH1Q2TAL8 776 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 RGS22Q8NE09 1264 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 EXOC6Q8TAG9 804 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ADAMTS19Q8TE59 1207 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 DDX41Q9UJV9 622 aaKnown RBP9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 PCDHA11Q9Y5I1 949 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
SCARNA20.3-201ENST00000516913 DMDP11532 3685 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 PTPRSQ13332 1948 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TCF20Q9UGU0 1960 aaKnown RBP9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MMP3P08254 477 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 POU3F3P20264 500 aaPredicted RBP9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 NUCB1Q02818 461 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 RAB30Q15771 203 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CDC37Q16543 378 aaPredicted RBP9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MFSD6Q6ZSS7 791 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SEPT14Q6ZU15 432 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 CHST3Q7LGC8 479 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MTMR8Q96EF0 704 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 TTC14Q96N46 770 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 SLC28A3Q9HAS3 691 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 VAT1LQ9HCJ6 419 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 MSRAQ9UJ68 235 aa9.72□□□□□ -0.85
SCARNA20.3-201ENST00000516913 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HAS3O00219 553 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CYTH3O43739 400 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 TLL1O43897 1013 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HOXD8P13378 290 aaPredicted RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GSPT1P15170 499 aaKnown RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 COL9A1P20849 921 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PTH1RQ03431 593 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PDE4DQ08499 809 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GRB10Q13322 594 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PPP2R5BQ15173 497 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 FAM47CQ5HY64 1035 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PPP2R2DQ66LE6 453 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 NFRKBQ6P4R8 1299 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms