RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 OPLAHO14841 1288 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CTAGE5O15320 804 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CYTH3O43739 400 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TGFB3P10600 412 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SMPD1P17405 629 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SNAP25P60880 206 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PTPN11Q06124 597 aaPredicted RBP6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 STXBP2Q15833 593 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 KCNA10Q16322 511 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GNPTABQ3T906 1256 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GNASQ5JWF2 1037 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 XRRA1Q6P2D8 792 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 APOA5Q6Q788 366 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SYNE3Q6ZMZ3 975 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 NFXL1Q6ZNB6 911 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 HOMER1Q86YM7 354 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FAM126BQ8IXS8 530 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SLC43A3Q8NBI5 491 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 KCNB2Q92953 911 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RRP36Q96EU6 259 aaKnown RBP6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RMDN3Q96TC7 470 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 KATNAL1Q9BW62 490 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 WDR11Q9BZH6 1224 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PXMP2Q9NR77 195 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TBX21Q9UL17 535 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PCDHA1Q9Y5I3 950 aa6.94□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TRIOBPQ9H2D6 2365 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CCDC196A0A1B0GTZ2 297 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MYADML2A6NDP7 307 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 A6NJR5 290 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GCOM1H8Y6P7 765 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PQBP1O60828 265 aaKnown RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 EIF3JO75822 258 aaKnown RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CFBP00751 764 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GH1P01241 217 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MYCNP04198 464 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PFKMP08237 780 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SUPT20HL2P0C7V6 817 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 POLR2MP0CAP2 368 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 RAG1P15918 1043 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SYN1P17600 705 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PSMA5P28066 241 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CCND2P30279 289 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 HSPA4P34932 840 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CDK7P50613 346 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PURAQ00577 322 aaKnown RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PSRC1Q6PGN9 363 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TMTC3Q6ZXV5 915 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 NOL8Q76FK4 1167 aaKnown RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 SESTD1Q86VW0 696 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MICU3Q86XE3 530 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 OR6J1Q8NGC5 347 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CUL5Q93034 780 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 INPP4AQ96PE3 977 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PIGSQ96S52 555 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PDCD2LQ9BRP1 358 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 AGXT2Q9BYV1 514 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GLT8D2Q9H1C3 349 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CPVLQ9H3G5 476 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 EHMT1Q9H9B1 1298 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PRDM5Q9NQX1 630 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 GPHNQ9NQX3 736 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TAF6LQ9Y6J9 622 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 DNAH12Q6ZR08 3092 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PITPNM1O00562 1244 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ZBTB43O43298 467 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PARNO95453 639 aaKnown RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 F2P00734 622 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CD4P01730 458 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 NR3C2P08235 984 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MMP3P08254 477 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TXNP10599 105 aaKnown RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 HOXD8P13378 290 aaPredicted RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 TLE2Q04725 743 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FPGSQ05932 587 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 AP3B2Q13367 1082 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PPIGQ13427 754 aaKnown RBP eCLIP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 ITGA7Q13683 1181 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PGM5Q15124 567 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MCTP2Q6DN12 878 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 NFRKBQ6P4R8 1299 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CCDC62Q6P9F0 684 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 EEPD1Q7L9B9 569 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FAM177A1Q8N128 213 aaPredicted RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PPTC7Q8NI37 304 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 FERMT2Q96AC1 680 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 CDHR1Q96JP9 859 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MTG1Q9BT17 334 aaPredicted RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MTIF3Q9H2K0 278 aaKnown RBP6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 PPP4R2Q9NY27 417 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 COL20A1Q9P218 1284 aa6.92□□□□□ -1.3
SCARNA18.1-201ENST00000516330 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms