RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TRAPPC11Q7Z392 1133 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 SAMD15Q9P1V8 674 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 ALDH1B1P30837 517 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 NEDD9Q14511 834 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 ARL8AQ96BM9 186 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 MS4A14Q96JA4 679 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 TARSL2A2RTX5 802 aaKnown RBP15□□□□□ -0.01
SH3TC1-225ENST00000515682 LRRC41Q15345 812 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 NTRK3Q16288 839 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 DCAF17Q5H9S7 520 aaPredicted RBP15□□□□□ -0.01
SH3TC1-225ENST00000515682 SMIM5Q71RC9 77 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 DAAM2Q86T65 1068 aa15□□□□□ -0.01
SH3TC1-225ENST00000515682 PACSIN2Q9UNF0 486 aaPredicted RBP15□□□□□ -0.01
SH3TC1-225ENST00000515682 BAZ2BQ9UIF8 2168 aaKnown RBP14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 ANO9A1A5B4 782 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 PSMD14O00487 310 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 ZNF76P36508 570 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 RPAINQ86UA6 219 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 LSM14BQ9BX40 385 aaKnown RBP14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 SAP30BPQ9UHR5 308 aaKnown RBP14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 OVOS2A0A0G2JMS6 1433 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 A0A087X0B3 334 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 TMC4Q7Z404 712 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 SPATS2Q86XZ4 545 aaKnown RBP14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 GOLGA8HP0CJ92 632 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 GNAQP50148 359 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 APBA1Q02410 837 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 TCP11Q8WWU5 503 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 DISC1Q9NRI5 854 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 SNX12Q9UMY4 172 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 ITIH6Q6UXX5 1313 aa14.99□□□□□ -0.01
SH3TC1-225ENST00000515682 PDE6BP35913 854 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 GKAP1Q5VSY0 366 aaPredicted RBP14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 EPB41L4AQ9HCS5 686 aaPredicted RBP14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 C6orf50Q9HD87 102 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 SPATA31A6Q5VVP1 1343 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 TMEM110-MUSTN1A8MSY1 372 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 PEX19P40855 299 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 GTF2IP78347 998 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 MDM2Q00987 491 aaPredicted RBP14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 ASIC2Q16515 512 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 HDAC7Q8WUI4 952 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 HPS3Q969F9 1004 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 THAP9Q9H5L6 903 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 TSKSQ9UJT2 592 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 CAPN11Q9UMQ6 739 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 PLAAQ9Y263 795 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 CHUKO15111 745 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 PRPF3O43395 683 aaKnown RBP14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 CCNE1P24864 410 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 SARSP49591 514 aaKnown RBP14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 TFAP4Q01664 338 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 PPP2R5AQ15172 486 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 CDKAL1Q5VV42 579 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 CCDC155Q8N6L0 562 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 RETREG2Q8NC44 543 aa14.98□□□□□ -0.01
SH3TC1-225ENST00000515682 MEFVO15553 781 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 NMT2O60551 498 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 SYF2O95926 243 aaKnown RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 PLEKP08567 350 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 MYBL2P10244 700 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 GFPT1Q06210 699 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 ENAHQ8N8S7 591 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 GOLGA6L10A0A0M3HER8 536 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 PLCG1P19174 1290 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 UBE4AQ14139 1066 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 TTLL12Q14166 644 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 LARGE2Q8N3Y3 721 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 PAIP2Q9BPZ3 127 aaKnown RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 CD248Q9HCU0 757 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 NOVA2Q9UNW9 492 aaKnown RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 GSTTP1A0A1W2PQM5 241 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 KRIT1O00522 736 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 KIF4AO95239 1232 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 IFNAR2P48551 515 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 SNX29Q8TEQ0 813 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 DHTKD1Q96HY7 919 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 ZIM3Q96PE6 472 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 PXDNQ92626 1479 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 HIBCHQ6NVY1 386 aaPredicted RBP14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 CCDC26Q8TAB7 109 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 MGARPQ8TDB4 240 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 ISCA1Q9BUE6 129 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 AP1M1Q9BXS5 423 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 NBPF3Q9H094 633 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
SH3TC1-225ENST00000515682 ZNF804BA4D1E1 1349 aa14.96□□□□□ -0.01
SH3TC1-225ENST00000515682 RNF225M0QZC1 329 aaPredicted RBP14.96□□□□□ -0.01
SH3TC1-225ENST00000515682 NEFHP12036 1026 aa14.96□□□□□ -0.01
SH3TC1-225ENST00000515682 HERVK_113P62684 666 aa14.96□□□□□ -0.01
SH3TC1-225ENST00000515682 MFSD14BQ5SR56 506 aa14.96□□□□□ -0.01
SH3TC1-225ENST00000515682 MICAL1Q8TDZ2 1067 aa14.96□□□□□ -0.01
SH3TC1-225ENST00000515682 NDST4Q9H3R1 872 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms