RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 ZBBXA8MT70 800 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 ZNF213O14771 459 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 SDSP20132 328 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 MRPS5P82675 430 aaKnown RBP17.62■□□□□ 0.41
DDR1-278ENST00000515233 AAMPQ13685 434 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 TTLL4Q14679 1199 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 CCDC85BQ15834 202 aaPredicted RBP17.62■□□□□ 0.41
DDR1-278ENST00000515233 CCDC178Q5BJE1 867 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 PPP2R2DQ66LE6 453 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 TBC1D10CQ8IV04 446 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 COPS5Q92905 334 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 RILPL2Q969X0 211 aa17.62■□□□□ 0.41
DDR1-278ENST00000515233 MUC3AQ02505 3323 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 SCN5AQ14524 2016 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 IQCF3P0C7M6 154 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 ACTN1P12814 892 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 MYOGP15173 224 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 FAM47CQ5HY64 1035 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 CCDC62Q6P9F0 684 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 DEFB128Q7Z7B8 93 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 PHOSPHO2Q8TCD6 241 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 ANKS1AQ92625 1134 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 ZKSCAN3Q9BRR0 538 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 UBA5Q9GZZ9 404 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
DDR1-278ENST00000515233 ARIH2O95376 493 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 POU3F3P20264 500 aaPredicted RBP17.6■□□□□ 0.41
DDR1-278ENST00000515233 USH1GQ495M9 461 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 TMEM67Q5HYA8 995 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 IQCA1Q86XH1 822 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 SMC5Q8IY18 1101 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 RETREG2Q8NC44 543 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 NEDD4P46934 1319 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 TTC28Q96AY4 2481 aa17.6■□□□□ 0.41
DDR1-278ENST00000515233 ABCB11O95342 1321 aa17.59■□□□□ 0.41
DDR1-278ENST00000515233 BFSP2Q13515 415 aa17.59■□□□□ 0.41
DDR1-278ENST00000515233 IWS1Q96ST2 819 aa17.59■□□□□ 0.41
DDR1-278ENST00000515233 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
DDR1-278ENST00000515233 TSPYL2Q9H2G4 693 aaPredicted RBP17.59■□□□□ 0.41
DDR1-278ENST00000515233 CPVLQ9H3G5 476 aa17.59■□□□□ 0.41
DDR1-278ENST00000515233 KDM4AO75164 1064 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 CDC37Q16543 378 aaPredicted RBP17.58■□□□□ 0.4
DDR1-278ENST00000515233 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 MCF2L2Q86YR7 1114 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 ADGRF4Q8IZF3 695 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
DDR1-278ENST00000515233 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.4
DDR1-278ENST00000515233 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 KAT14Q9H8E8 782 aa17.58■□□□□ 0.4
DDR1-278ENST00000515233 GH1P01241 217 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 CA3P07451 260 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 MMP3P08254 477 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 STXBP2Q15833 593 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 LY6KQ17RY6 165 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 CAGE1Q8TC20 777 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 PPP1R13LQ8WUF5 828 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 AFG1LQ8WV93 481 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 ZSCAN10Q96SZ4 725 aaPredicted RBP17.57■□□□□ 0.4
DDR1-278ENST00000515233 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
DDR1-278ENST00000515233 ZSWIM5Q9P217 1185 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 NOD1Q9Y239 953 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 KIAA1217Q5T5P2 1943 aa17.57■□□□□ 0.4
DDR1-278ENST00000515233 TANC1Q9C0D5 1861 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 REV3LO60673 3130 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 BAIAP3O94812 1187 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 CASTP20810 708 aaKnown RBP17.56■□□□□ 0.4
DDR1-278ENST00000515233 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 PTGISQ16647 500 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
DDR1-278ENST00000515233 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 CCDC155Q8N6L0 562 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 ADAMTS19Q8TE59 1207 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 FTOQ9C0B1 505 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDR1-278ENST00000515233 COL20A1Q9P218 1284 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 MRPL11Q9Y3B7 192 aaKnown RBP17.56■□□□□ 0.4
DDR1-278ENST00000515233 TRIP12Q14669 1992 aaPredicted RBP17.56■□□□□ 0.4
DDR1-278ENST00000515233 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
DDR1-278ENST00000515233 TRANK1O15050 2925 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 B4E1Z4 1266 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 HIP1O00291 1037 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 PARNO95453 639 aaKnown RBP17.55■□□□□ 0.4
DDR1-278ENST00000515233 RBL2Q08999 1139 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 SEPT14Q6ZU15 432 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 FBXO11Q86XK2 927 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 HERC6Q8IVU3 1022 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
DDR1-278ENST00000515233 AFAP1L1Q8TED9 768 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 KAT2BQ92831 832 aa17.55■□□□□ 0.4
DDR1-278ENST00000515233 EMID1Q96A84 441 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms