RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 DENND5AQ6IQ26 1287 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 GTF2IRD2Q86UP8 949 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 CCDC103Q8IW40 242 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 USP33Q8TEY7 942 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 ALG3Q92685 438 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 PPP1R14AQ96A00 147 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 CCSER2Q9H7U1 834 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 CYP26B1Q9NR63 512 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 SPATA6Q9NWH7 488 aaPredicted RBP3.89□□□□□ -1.79
PDGFC-208ENST00000512711 BTG4Q9NY30 223 aa3.89□□□□□ -1.79
PDGFC-208ENST00000512711 SGSM2O43147 1006 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 ITGAVP06756 1048 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 HTRA3P83110 453 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 NFIXQ14938 502 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 SKOR2Q2VWA4 1001 aaPredicted RBP3.88□□□□□ -1.79
PDGFC-208ENST00000512711 MRM1Q6IN84 353 aaKnown RBP3.88□□□□□ -1.79
PDGFC-208ENST00000512711 DBX2Q6ZNG2 339 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 SAPCD2Q86UD0 394 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 STK32CQ86UX6 486 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 TEX2Q8IWB9 1127 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 TRIM59Q8IWR1 403 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 FAM26EQ8N5C1 309 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 NPLOC4Q8TAT6 608 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 MMP19Q99542 508 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 SPATA25Q9BR10 227 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 NKX2-4Q9H2Z4 354 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 RTEL1Q9NZ71 1219 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.88□□□□□ -1.79
PDGFC-208ENST00000512711 PMF1-BGLAPU3KQ54 211 aa3.88□□□□□ -1.79
PDGFC-208ENST00000512711 NOP56O00567 594 aaKnown RBP3.87□□□□□ -1.79
PDGFC-208ENST00000512711 NPHS1O60500 1241 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 CAPNS1P04632 268 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 SYN1P17600 705 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 ERCC5P28715 1186 aaPredicted RBP3.87□□□□□ -1.79
PDGFC-208ENST00000512711 GRIA2P42262 883 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 NCAPHQ15003 741 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 PRSS53Q2L4Q9 553 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 LARP1BQ659C4 914 aaKnown RBP3.87□□□□□ -1.79
PDGFC-208ENST00000512711 WWC2Q6AWC2 1192 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 B3GNT8Q7Z7M8 397 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 GGNQ86UU5 652 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 FAM178BQ8IXR5 827 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 KREMEN2Q8NCW0 462 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 SMARCC2Q8TAQ2 1214 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 BTN2A2Q8WVV5 523 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 DDX11Q96FC9 970 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 TSPAN17Q96FV3 270 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 PEX11GQ96HA9 241 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 RNF38Q9H0F5 515 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 CAPN10Q9HC96 672 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 LUC7LQ9NQ29 371 aaKnown RBP3.87□□□□□ -1.79
PDGFC-208ENST00000512711 MARCH2Q9P0N8 246 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 FBXL7Q9UJT9 491 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 FAN1Q9Y2M0 1017 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 DUSP10Q9Y6W6 482 aa3.87□□□□□ -1.79
PDGFC-208ENST00000512711 C22orf46C9J442 243 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 DDAH1O94760 285 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 LCP1P13796 627 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 FPR2P25090 351 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 ECI1P42126 302 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 KCNC1P48547 511 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 CACNB2Q08289 660 aaPredicted RBP3.86□□□□□ -1.79
PDGFC-208ENST00000512711 SMAD4Q13485 552 aaKnown RBP3.86□□□□□ -1.79
PDGFC-208ENST00000512711 SV2CQ496J9 727 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 LIPIQ6XZB0 460 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 CEP68Q76N32 757 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 FERMT3Q86UX7 667 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 NLGN1Q8N2Q7 840 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 NETO2Q8NC67 525 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 CXorf38Q8TB03 319 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 DDX1Q92499 740 aaKnown RBP3.86□□□□□ -1.79
PDGFC-208ENST00000512711 STRIP2Q9ULQ0 834 aa3.86□□□□□ -1.79
PDGFC-208ENST00000512711 SH3D21A4FU49 640 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 GJB6O95452 261 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 SSBP05455 408 aaKnown RBP eCLIP3.85□□□□□ -1.79
PDGFC-208ENST00000512711 C8BP07358 591 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 BCL6P41182 706 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 ZNF143P52747 638 aaPredicted RBP3.85□□□□□ -1.79
PDGFC-208ENST00000512711 CAP1Q01518 475 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 SLC9A5Q14940 896 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 RTP5Q14D33 572 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 NT5DC1Q5TFE4 455 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 POMZP3Q6PJE2 187 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 CABP7Q86V35 215 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 NLRP10Q86W26 655 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 ZNF227Q86WZ6 799 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 RCBTB1Q8NDN9 531 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 CPA5Q8WXQ8 436 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 ZBTB8AQ96BR9 441 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 GORASP1Q9BQQ3 440 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 ZNF408Q9H9D4 720 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 ST7Q9NRC1 585 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 ACTR10Q9NZ32 417 aa3.85□□□□□ -1.79
PDGFC-208ENST00000512711 TRBV23OR9-2A0A075B6M9 112 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 SUSD5O60279 629 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 NOBOXO60393 691 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 ZBTB7AO95365 584 aa3.84□□□□□ -1.79
PDGFC-208ENST00000512711 SNRPB2P08579 225 aaKnown RBP3.84□□□□□ -1.79
PDGFC-208ENST00000512711 HOXC12P31275 282 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms