RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 RIC8AQ9NPQ8 531 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 SH3GLB2Q9NR46 395 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 PXMP2Q9NR77 195 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
COL6A6-203ENST00000511332 FRMPD4Q14CM0 1322 aa14.77□□□□□ -0.04
COL6A6-203ENST00000511332 SEPT4O43236 478 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 PPFIA3O75145 1194 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 SNAI1O95863 264 aaPredicted RBP14.77□□□□□ -0.05
COL6A6-203ENST00000511332 GJB1P08034 283 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 CAPN2P17655 700 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 XBP1P17861 261 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 EDNRBP24530 442 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 CNGA1P29973 690 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 GNA11P29992 359 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 CCND3P30281 292 aaPredicted RBP14.77□□□□□ -0.05
COL6A6-203ENST00000511332 TYW1BQ6NUM6 668 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 PURBQ96QR8 312 aaKnown RBP14.77□□□□□ -0.05
COL6A6-203ENST00000511332 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 LLPHQ9BRT6 129 aaKnown RBP14.77□□□□□ -0.05
COL6A6-203ENST00000511332 EHMT1Q9H9B1 1298 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 C6orf50Q9HD87 102 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 VTA1Q9NP79 307 aa14.77□□□□□ -0.05
COL6A6-203ENST00000511332 ZHX1Q9UKY1 873 aaPredicted RBP14.77□□□□□ -0.05
COL6A6-203ENST00000511332 KIAA0100Q14667 2235 aaKnown RBP14.76□□□□□ -0.05
COL6A6-203ENST00000511332 SMCO2A6NFE2 343 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 SPDYE3A6NKU9 549 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 MEIS2O14770 477 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 CTDNEP1O95476 244 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 AKR1A1P14550 325 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 EIF2AK2P19525 551 aaKnown RBP14.76□□□□□ -0.05
COL6A6-203ENST00000511332 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 MCTP2Q6DN12 878 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 USP17L6PQ6QN14 398 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 FCHSD1Q86WN1 690 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 NSUN7Q8NE18 718 aaKnown RBP14.76□□□□□ -0.05
COL6A6-203ENST00000511332 TRPV1Q8NER1 839 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 BICD2Q8TD16 824 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 ZMYND12Q9H0C1 365 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 VPS54Q9P1Q0 977 aa14.76□□□□□ -0.05
COL6A6-203ENST00000511332 ORC3Q9UBD5 711 aaPredicted RBP14.76□□□□□ -0.05
COL6A6-203ENST00000511332 DDX20Q9UHI6 824 aaKnown RBP14.76□□□□□ -0.05
COL6A6-203ENST00000511332 ZNF865P0CJ78 1059 aaPredicted RBP14.75□□□□□ -0.05
COL6A6-203ENST00000511332 GJA8P48165 433 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 ST3GAL1Q11201 340 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 AP3B2Q13367 1082 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 PGM5Q15124 567 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 STXBP2Q15833 593 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 UBE2SQ16763 222 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 PRAMEF19Q5SWL8 479 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 FBXO16Q8IX29 292 aaPredicted RBP14.75□□□□□ -0.05
COL6A6-203ENST00000511332 REXO1Q8N1G1 1221 aaKnown RBP14.75□□□□□ -0.05
COL6A6-203ENST00000511332 U2AF1L4Q8WU68 220 aaKnown RBP14.75□□□□□ -0.05
COL6A6-203ENST00000511332 DEFB118Q96PH6 123 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 PDCD2LQ9BRP1 358 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 KATNBL1Q9H079 304 aa14.75□□□□□ -0.05
COL6A6-203ENST00000511332 STAM2O75886 525 aa14.74□□□□□ -0.05
COL6A6-203ENST00000511332 CD2BP2O95400 341 aaKnown RBP14.74□□□□□ -0.05
COL6A6-203ENST00000511332 FOSP01100 380 aaPredicted RBP14.74□□□□□ -0.05
COL6A6-203ENST00000511332 RARBP10826 455 aa14.74□□□□□ -0.05
COL6A6-203ENST00000511332 CCND2P30279 289 aa14.74□□□□□ -0.05
COL6A6-203ENST00000511332 HMGN5P82970 282 aaKnown RBP14.74□□□□□ -0.05
COL6A6-203ENST00000511332 GALNT17Q6IS24 598 aa14.74□□□□□ -0.05
COL6A6-203ENST00000511332 FAM184BQ9ULE4 1060 aa14.74□□□□□ -0.05
COL6A6-203ENST00000511332 BRCA2P51587 3418 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 SGPL1O95470 568 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 NR3C2P08235 984 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 CLK2P49760 499 aaKnown RBP14.73□□□□□ -0.05
COL6A6-203ENST00000511332 SOX10P56693 466 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 NLRP5P59047 1200 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 CCDC144BQ3MJ40 725 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 XRRA1Q6P2D8 792 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 EEPD1Q7L9B9 569 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 SCFD2Q8WU76 684 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 ALG1Q9BT22 464 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 DDX49Q9Y6V7 483 aaKnown RBP14.73□□□□□ -0.05
COL6A6-203ENST00000511332 DOCK5Q9H7D0 1870 aa14.73□□□□□ -0.05
COL6A6-203ENST00000511332 POTEFA5A3E0 1075 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 JAK2O60674 1132 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
COL6A6-203ENST00000511332 MYCLP12524 364 aaPredicted RBP14.72□□□□□ -0.05
COL6A6-203ENST00000511332 TRIM29Q14134 588 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 GNPTABQ3T906 1256 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 PCNX4Q63HM2 1172 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 ANKLE1Q8NAG6 615 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 DAGLBQ8NCG7 672 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 AIFM3Q96NN9 605 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 ANO3Q9BYT9 981 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 CRISPLD2Q9H0B8 497 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 PCDHA4Q9UN74 947 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 KIF3AQ9Y496 699 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
COL6A6-203ENST00000511332 RBM47A0AV96 593 aaKnown RBP14.71□□□□□ -0.05
COL6A6-203ENST00000511332 DUSP11O75319 330 aaKnown RBP14.71□□□□□ -0.05
COL6A6-203ENST00000511332 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
COL6A6-203ENST00000511332 FDPSP14324 419 aaKnown RBP14.71□□□□□ -0.05
COL6A6-203ENST00000511332 TNFAIP2Q03169 654 aa14.71□□□□□ -0.05
COL6A6-203ENST00000511332 TTLL4Q14679 1199 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms