RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SENP2Q9HC62 589 aa21.63■■□□□ 1.05
UBE3D-207ENST00000509102 PNMA6FA0A0J9YX94 578 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 RBM47A0AV96 593 aaKnown RBP21.62■■□□□ 1.05
UBE3D-207ENST00000509102 ARVCFO00192 962 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 LIFRP42702 1097 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 KRT32Q14532 448 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 TTLL4Q14679 1199 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 STXBP2Q15833 593 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 SYNE3Q6ZMZ3 975 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 OR6J1Q8NGC5 347 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 PIGSQ96S52 555 aa21.62■■□□□ 1.05
UBE3D-207ENST00000509102 GPHNQ9NQX3 736 aaPredicted RBP21.62■■□□□ 1.05
UBE3D-207ENST00000509102 SEC63Q9UGP8 760 aaKnown RBP21.62■■□□□ 1.05
UBE3D-207ENST00000509102 SH2B2O14492 632 aaPredicted RBP21.61■■□□□ 1.05
UBE3D-207ENST00000509102 CTAGE5O15320 804 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 IRX5P78411 483 aaPredicted RBP21.61■■□□□ 1.05
UBE3D-207ENST00000509102 CXCL17Q6UXB2 119 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 TBC1D5Q92609 795 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 BADQ92934 168 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 RRP36Q96EU6 259 aaKnown RBP21.61■■□□□ 1.05
UBE3D-207ENST00000509102 TAAR1Q96RJ0 339 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 POLR3EQ9NVU0 708 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 SLC12A7Q9Y666 1083 aa21.61■■□□□ 1.05
UBE3D-207ENST00000509102 TRIM43BA6NCK2 446 aa21.6■■□□□ 1.05
UBE3D-207ENST00000509102 KIAA0355O15063 1070 aa21.6■■□□□ 1.05
UBE3D-207ENST00000509102 TXNP10599 105 aaKnown RBP21.6■■□□□ 1.05
UBE3D-207ENST00000509102 LRIT3Q3SXY7 679 aa21.6■■□□□ 1.05
UBE3D-207ENST00000509102 TRIM43Q96BQ3 446 aaPredicted RBP21.6■■□□□ 1.05
UBE3D-207ENST00000509102 NEK1Q96PY6 1258 aa21.6■■□□□ 1.05
UBE3D-207ENST00000509102 GCOM1H8Y6P7 765 aaPredicted RBP21.59■■□□□ 1.05
UBE3D-207ENST00000509102 POLR2MP0CAP2 368 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 EIF2AK2P19525 551 aaKnown RBP21.59■■□□□ 1.05
UBE3D-207ENST00000509102 SMARCA1P28370 1054 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 HSD17B4P51659 736 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 FAAP100Q0VG06 881 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 SH3RF1Q7Z6J0 888 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 MYL10Q9BUA6 226 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 SPZ1Q9BXG8 430 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 COL20A1Q9P218 1284 aa21.59■■□□□ 1.05
UBE3D-207ENST00000509102 CYTH3O43739 400 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 KPNA6O60684 536 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 PPP1R11O60927 126 aaPredicted RBP21.58■■□□□ 1.05
UBE3D-207ENST00000509102 EIF3JO75822 258 aaKnown RBP21.58■■□□□ 1.05
UBE3D-207ENST00000509102 HMGB1P09429 215 aaKnown RBP21.58■■□□□ 1.05
UBE3D-207ENST00000509102 CDK7P50613 346 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 GHRHRQ02643 423 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 ITGA7Q13683 1181 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 SEPT14Q6ZU15 432 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 PIBF1Q8WXW3 757 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 PXMP2Q9NR77 195 aa21.58■■□□□ 1.05
UBE3D-207ENST00000509102 LTBP2Q14767 1821 aa21.57■■□□□ 1.04
UBE3D-207ENST00000509102 REC8O95072 547 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 NR3C2P08235 984 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 MYL3P08590 195 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 HOXA13P31271 388 aaPredicted RBP21.56■■□□□ 1.04
UBE3D-207ENST00000509102 FGD1P98174 961 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 FPGSQ05932 587 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 TMEM63BQ5T3F8 832 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 DHX32Q7L7V1 743 aaKnown RBP21.56■■□□□ 1.04
UBE3D-207ENST00000509102 CUL5Q93034 780 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 LRRC2Q9BYS8 371 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 PCDH10Q9P2E7 1040 aa21.56■■□□□ 1.04
UBE3D-207ENST00000509102 OPLAHO14841 1288 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 TIMP1P01033 207 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 GH1P01241 217 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 PTGS1P23219 599 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 TSGA10IPQ3SY00 556 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 GPR153Q6NV75 609 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 SGMS1Q86VZ5 419 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 FAM126BQ8IXS8 530 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 MTG1Q9BT17 334 aaPredicted RBP21.55■■□□□ 1.04
UBE3D-207ENST00000509102 TBX21Q9UL17 535 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 MRVI1Q9Y6F6 885 aa21.55■■□□□ 1.04
UBE3D-207ENST00000509102 SOX1O00570 391 aaPredicted RBP21.54■■□□□ 1.04
UBE3D-207ENST00000509102 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
UBE3D-207ENST00000509102 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
UBE3D-207ENST00000509102 SLC35G1Q2M3R5 365 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 KCNV1Q6PIU1 500 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 FCHSD1Q86WN1 690 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 MICU3Q86XE3 530 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 FANCBQ8NB91 859 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 SLC43A3Q8NBI5 491 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 LRCH3Q96II8 777 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
UBE3D-207ENST00000509102 A6NJR5 290 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 RXRAP19793 462 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 CCND2P30279 289 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 PURAQ00577 322 aaKnown RBP21.53■■□□□ 1.04
UBE3D-207ENST00000509102 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 CCDC62Q6P9F0 684 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 TMEM199Q8N511 208 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 COPS5Q92905 334 aa21.53■■□□□ 1.04
UBE3D-207ENST00000509102 RBM28Q9NW13 759 aaKnown RBP21.53■■□□□ 1.04
UBE3D-207ENST00000509102 BAZ2BQ9UIF8 2168 aaKnown RBP21.53■■□□□ 1.04
UBE3D-207ENST00000509102 PLEKHA8P1O95397 391 aa21.52■■□□□ 1.04
UBE3D-207ENST00000509102 SUPT20HL2P0C7V6 817 aa21.52■■□□□ 1.04
UBE3D-207ENST00000509102 PSMC6P62333 389 aa21.52■■□□□ 1.04
UBE3D-207ENST00000509102 PGM5Q15124 567 aa21.52■■□□□ 1.04
UBE3D-207ENST00000509102 LY6KQ17RY6 165 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms