RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 HSD17B3P37058 310 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 POLE2P56282 527 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 KCNJ12Q14500 433 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 SYCP3Q8IZU3 236 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ZNF317Q96PQ6 595 aaPredicted RBP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 MAF1Q9H063 256 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 NHEJ1Q9H9Q4 299 aaPredicted RBP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 HELLSQ9NRZ9 838 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 EHD2Q9NZN4 543 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ATXN10Q9UBB4 475 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 A0A0G2JLW4 131 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 M0R2C6 588 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 PCK1P35558 622 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 GRIN1Q05586 938 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 KLC1Q07866 573 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 TMEM154Q6P9G4 183 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 LCA5Q86VQ0 697 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 SESTD1Q86VW0 696 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 LRRC45Q96CN5 670 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 FGD4Q96M96 766 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 GSDMAQ96QA5 445 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 VCXQ9H320 206 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 SH2D4AQ9H788 454 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ECT2Q9H8V3 914 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 ZNHIT6Q9NWK9 470 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
PDGFRA-207ENST00000509092 NWD1Q149M9 1564 aa11.02□□□□□ -0.64
PDGFRA-207ENST00000509092 A8MUI8 341 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 BAG3O95817 575 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 GNAZP19086 355 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 MSH2P43246 934 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 IFT43Q96FT9 208 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 IFT74Q96LB3 600 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 IQCGQ9H095 443 aaKnown RBP11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 RMI1Q9H9A7 625 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 INCENPQ9NQS7 918 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 SAMD15Q9P1V8 674 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 CTNNAL1Q9UBT7 734 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 PALLDQ8WX93 1383 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.65
PDGFRA-207ENST00000509092 HIP1RO75146 1068 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 KRT16P08779 473 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 CXCR5P32302 372 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 GBP1P32455 592 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 CTNNA1P35221 906 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 PPARDQ03181 441 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 DPYDQ12882 1025 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 UAP1Q16222 522 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 SMYD4Q8IYR2 804 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 FBF1Q8TES7 1133 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 HAUS7Q99871 368 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 RAB17Q9H0T7 212 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 ARHGEF3Q9NR81 526 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 LRWD1Q9UFC0 647 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 TMCO1Q9UM00 188 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 PRC1O43663 620 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 CTNND1O60716 968 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 UBOX5O94941 541 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 PDHA1P08559 390 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 HSPD1P10809 573 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 ACADSP16219 412 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 MAGOHP61326 146 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 ENOX2Q16206 610 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 OR52E8Q6IFG1 317 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 KBTBD3Q8NAB2 608 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 OR2W6PQ8NHA6 318 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 MAGOHBQ96A72 148 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 LZTS2Q9BRK4 669 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 ABCF3Q9NUQ8 709 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 AATFQ9NY61 560 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 BCL9O00512 1426 aa11.01□□□□□ -0.65
PDGFRA-207ENST00000509092 A0A0G2JS52 829 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 LGALS16A8MUM7 142 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
PDGFRA-207ENST00000509092 MOCS3O95396 460 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 GSTA2P09210 222 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 STAT6P42226 847 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 CDK17Q00537 523 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 LMNB2Q03252 620 aa11□□□□□ -0.65
PDGFRA-207ENST00000509092 DEUP1Q05D60 604 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms