RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SREBF1P36956 1147 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 USP11P51784 963 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 STK38Q15208 465 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
RFC1-211ENST00000509084 INF2Q27J81 1249 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 EARS2Q5JPH6 523 aaKnown RBP11.82□□□□□ -0.52
RFC1-211ENST00000509084 NSMFQ6X4W1 530 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
RFC1-211ENST00000509084 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 ADGRA2Q96PE1 1338 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 FAM205CA6NFA0 338 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 PPP6R2O75170 966 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 TOB1P50616 345 aaPredicted RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 RPS6P62753 249 aaKnown RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 ARHGAP4P98171 946 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 SLC39A14Q15043 492 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 PPP4R3AQ6IN85 833 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 ANKRD13CQ8N6S4 541 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 LINC00301Q8NCQ3 95 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 A1CFQ9NQ94 594 aaKnown RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
RFC1-211ENST00000509084 RCOR1Q9UKL0 485 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 FRMPD4Q14CM0 1322 aa11.81□□□□□ -0.52
RFC1-211ENST00000509084 THSD7BQ9C0I4 1608 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 B4DLN1 442 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 ADAMTS3O15072 1205 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 SPTLC2O15270 562 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 NEMFO60524 1076 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 CCNT1O60563 726 aaKnown RBP11.8□□□□□ -0.52
RFC1-211ENST00000509084 TLR2O60603 784 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 CYP3A4P08684 503 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 ERCC3P19447 782 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 ATP2B1P20020 1258 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 MAPK4P31152 587 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 MAP2K2P36507 400 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 CEBPZQ03701 1054 aaKnown RBP11.8□□□□□ -0.52
RFC1-211ENST00000509084 GRM1Q13255 1194 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 BAATQ14032 418 aaPredicted RBP11.8□□□□□ -0.52
RFC1-211ENST00000509084 KCTD2Q14681 263 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
RFC1-211ENST00000509084 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 NOM1Q5C9Z4 860 aaKnown RBP11.8□□□□□ -0.52
RFC1-211ENST00000509084 XRRA1Q6P2D8 792 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 SLC30A10Q6XR72 485 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 DNERQ8NFT8 737 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 SYTL5Q8TDW5 730 aaPredicted RBP11.8□□□□□ -0.52
RFC1-211ENST00000509084 PGBD1Q96JS3 809 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 TXNRD2Q9NNW7 524 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 CYP39A1Q9NYL5 469 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 PCDHB6Q9Y5E3 794 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 IVNS1ABPQ9Y6Y0 642 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 RPTORQ8N122 1335 aa11.8□□□□□ -0.52
RFC1-211ENST00000509084 GOLGA6L4A6NEF3 574 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 CA12O43570 354 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 STRNO43815 780 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 BCRP11274 1271 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 FCER1AP12319 257 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 CIITAP33076 1130 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 MCM7P33993 719 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
RFC1-211ENST00000509084 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
RFC1-211ENST00000509084 PTPAQ15257 358 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 NFKBIBQ15653 356 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
RFC1-211ENST00000509084 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
RFC1-211ENST00000509084 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 TBC1D5Q92609 795 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 FERMT2Q96AC1 680 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 MMP19Q99542 508 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 FTOQ9C0B1 505 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFC1-211ENST00000509084 ADD3Q9UEY8 706 aaKnown RBP11.79□□□□□ -0.52
RFC1-211ENST00000509084 TCHHQ07283 1943 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 ZNF236Q9UL36 1845 aa11.79□□□□□ -0.52
RFC1-211ENST00000509084 MYH7BA7E2Y1 1941 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 SMCHD1A6NHR9 2005 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 CYP3A7-CYP3A51PA0A087WV96 503 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 CUTAO60888 179 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 PRPF40AO75400 957 aaKnown RBP11.78□□□□□ -0.52
RFC1-211ENST00000509084 STAM2O75886 525 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 MBD3O95983 291 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 OR52Z1P0C646 297 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 PYGBP11216 843 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 CYP3A7P24462 503 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 ZNF76P36508 570 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms