RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 KPNA6O60684 536 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 MCCP23508 829 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 ALDH5A1P51649 535 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 TFAP4Q01664 338 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 PTPN11Q06124 597 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 NBPF20Q3BBV1 942 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 BRDTQ58F21 947 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 RCSD1Q6JBY9 416 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 NSMFQ6X4W1 530 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 IFNL3Q8IZI9 196 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 WDR11Q9BZH6 1224 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 LRRCC1Q9C099 1032 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 ECHDC1Q9NTX5 307 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 CCPG1Q9ULG6 757 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
NEDD9-211ENST00000508546 ISY1Q9ULR0 285 aaKnown RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 RIF1Q5UIP0 2472 aaKnown RBP11.14□□□□□ -0.63
NEDD9-211ENST00000508546 RAD50Q92878 1312 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 APPP05067 770 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 ICAM1P05362 532 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 MYL3P08590 195 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 ZP2Q05996 745 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 BFSP2Q13515 415 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 LRRFIP1Q32MZ4 808 aaKnown RBP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 KCTD1Q719H9 257 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 OR6J1Q8NGC5 347 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 MFSD14AQ96MC6 490 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 NACAP1Q9BZK3 213 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 FTOQ9C0B1 505 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 CHMP4BQ9H444 224 aaKnown RBP11.13□□□□□ -0.63
NEDD9-211ENST00000508546 COL4A6Q14031 1691 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
NEDD9-211ENST00000508546 MYH6P13533 1939 aa11.12□□□□□ -0.63
NEDD9-211ENST00000508546 GVINP1Q7Z2Y8 2422 aa11.12□□□□□ -0.63
NEDD9-211ENST00000508546 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
NEDD9-211ENST00000508546 A6NJR5 290 aa11.12□□□□□ -0.63
NEDD9-211ENST00000508546 M0R2C6 588 aa11.12□□□□□ -0.63
NEDD9-211ENST00000508546 KRT37O76014 449 aa11.12□□□□□ -0.63
NEDD9-211ENST00000508546 BAATQ14032 418 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-211ENST00000508546 RANBP17Q9H2T7 1088 aaKnown RBP11.12□□□□□ -0.63
NEDD9-211ENST00000508546 ALG13Q9NP73 1137 aaKnown RBP11.12□□□□□ -0.63
NEDD9-211ENST00000508546 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 PARNO95453 639 aaKnown RBP11.11□□□□□ -0.63
NEDD9-211ENST00000508546 KCNJ6P48051 423 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 NOVP48745 357 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 SNAP25P60880 206 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 WDR5P61964 334 aaKnown RBP11.11□□□□□ -0.63
NEDD9-211ENST00000508546 PPARAQ07869 468 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 PPP2R5BQ15173 497 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 BTNL9Q6UXG8 535 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 ERMP1Q7Z2K6 904 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 AFAP1L1Q8TED9 768 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 SCFD2Q8WU76 684 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 NAPBQ9H115 298 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 IL17RBQ9NRM6 502 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 STX8Q9UNK0 236 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 NCOR2Q9Y618 2525 aa11.11□□□□□ -0.63
NEDD9-211ENST00000508546 LCHNA4D1U4 455 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
NEDD9-211ENST00000508546 NFIBO00712 420 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
NEDD9-211ENST00000508546 RGS20O76081 388 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 EDNRBP24530 442 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 ERVK-21P61565 698 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 HNRNPUQ00839 825 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEDD9-211ENST00000508546 RBL2Q08999 1139 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 MIER1Q8N108 512 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 DNERQ8NFT8 737 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 DCAF4Q8WV16 495 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 MPHOSPH6Q99547 160 aaKnown RBP11.1□□□□□ -0.63
NEDD9-211ENST00000508546 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 PNMA2Q9UL42 364 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEDD9-211ENST00000508546 MYO7AQ13402 2215 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 NLRC5Q86WI3 1866 aa11.1□□□□□ -0.63
NEDD9-211ENST00000508546 PTPDC1A2A3K4 754 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 TSPY2A6NKD2 308 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 GJB5O95377 273 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 CXCL10P02778 98 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 IRS1P35568 1242 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 PDE4DQ08499 809 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms