RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 ARHGAP4P98171 946 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 DNM1Q05193 864 aaKnown RBP16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 TMEM266Q2M3C6 531 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 MMP19Q99542 508 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 GJB4Q9NTQ9 266 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
HMGCLL1-208ENST00000508459 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 SPTLC2O15270 562 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 SLC26A4O43511 780 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 CYP2C8P10632 490 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 ERCC3P19447 782 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 CCND2P30279 289 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 CIITAP33076 1130 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 INF2Q27J81 1249 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 ARHGEF16Q5VV41 709 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 USP17L6PQ6QN14 398 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 PTPN18Q99952 460 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 BEGAINQ9BUH8 593 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 CYP39A1Q9NYL5 469 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 TCEAL9Q9UHQ7 104 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 FRMPD4Q14CM0 1322 aa16.37■□□□□ 0.21
HMGCLL1-208ENST00000508459 SLC15A5A6NIM6 579 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 ASB14A6NK59 587 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 IGF2BP3O00425 579 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 NFIBO00712 420 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 CCNT1O60563 726 aaKnown RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 GNRH1P01148 92 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 BCRP11274 1271 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 MCM4P33991 863 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 TXLNAP40222 546 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 ME1P48163 572 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 UBE2HP62256 183 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 IRF5Q13568 498 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 LETM2Q2VYF4 491 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 NOM1Q5C9Z4 860 aaKnown RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 ZNF467Q7Z7K2 595 aaPredicted RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 KRI1Q8N9T8 703 aaKnown RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 LINC00301Q8NCQ3 95 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 AK8Q96MA6 479 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 FAM20AQ96MK3 541 aa16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 A1CFQ9NQ94 594 aaKnown RBP16.36■□□□□ 0.21
HMGCLL1-208ENST00000508459 OPLAHO14841 1288 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 CNMDO75829 334 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 BAATQ14032 418 aaPredicted RBP16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 UBE2SQ16763 222 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 Q4G0T1 1027 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 TRMT44Q8IYL2 757 aaKnown RBP16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 KCTD17Q8N5Z5 321 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 LEO1Q8WVC0 666 aaPredicted RBP16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 DDX25Q9UHL0 483 aaKnown RBP16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 RPTORQ8N122 1335 aa16.35■□□□□ 0.21
HMGCLL1-208ENST00000508459 FIBPO43427 364 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 CUTAO60888 179 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 HOXD10P28358 340 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 HOXA13P31271 388 aaPredicted RBP16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 LONP1P36776 959 aaKnown RBP16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 ATP2C1P98194 919 aaPredicted RBP16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 GRM1Q13255 1194 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 STXBP2Q15833 593 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 CEP55Q53EZ4 464 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 MUM1L1Q5H9M0 696 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 ADALQ6DHV7 355 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 C17orf99Q6UX52 265 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 USP28Q96RU2 1077 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 PXMP2Q9NR77 195 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 ADGRA2Q96PE1 1338 aa16.34■□□□□ 0.21
HMGCLL1-208ENST00000508459 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.21
HMGCLL1-208ENST00000508459 A0A1W2PQ27 194 aa16.33■□□□□ 0.2
HMGCLL1-208ENST00000508459 A0A1W2PQ64 194 aa16.33■□□□□ 0.2
HMGCLL1-208ENST00000508459 A0A1W2PQD8 194 aa16.33■□□□□ 0.2
HMGCLL1-208ENST00000508459 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
HMGCLL1-208ENST00000508459 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
HMGCLL1-208ENST00000508459 HSPA6P17066 643 aa16.33■□□□□ 0.2
HMGCLL1-208ENST00000508459 MCM7P33993 719 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms