RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PCDHA6Q9UN73 950 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 KCNJ14Q9UNX9 436 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 PCDHA8Q9Y5H6 950 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 SYNGAP1Q96PV0 1343 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 CCDC194A0A1B0GVG4 234 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 PLXNB2O15031 1838 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 STAM2O75886 525 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 PDE4DQ08499 809 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 UBE2SQ16763 222 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 MAMDC4Q6UXC1 1216 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 NPLOC4Q8TAT6 608 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 TINF2Q9BSI4 451 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 PXMP2Q9NR77 195 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 FOXD4L1Q9NU39 408 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 NRBP1Q9UHY1 535 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 CNPY2Q9Y2B0 182 aa22.95■■□□□ 1.26
USP53-203ENST00000507597 CCND2P30279 289 aa22.94■■□□□ 1.26
USP53-203ENST00000507597 GRK4P32298 578 aa22.94■■□□□ 1.26
USP53-203ENST00000507597 CLK2P49760 499 aaKnown RBP22.94■■□□□ 1.26
USP53-203ENST00000507597 UBXN2AP68543 259 aa22.94■■□□□ 1.26
USP53-203ENST00000507597 STXBP2Q15833 593 aa22.94■■□□□ 1.26
USP53-203ENST00000507597 JAKMIP3Q5VZ66 844 aa22.94■■□□□ 1.26
USP53-203ENST00000507597 ANO3Q9BYT9 981 aa22.94■■□□□ 1.26
USP53-203ENST00000507597 FOXP1Q9H334 677 aaPredicted RBP22.94■■□□□ 1.26
USP53-203ENST00000507597 SOWAHBA6NEL2 793 aa22.93■■□□□ 1.26
USP53-203ENST00000507597 HMGCRP04035 888 aa22.93■■□□□ 1.26
USP53-203ENST00000507597 FOSBP53539 338 aa22.93■■□□□ 1.26
USP53-203ENST00000507597 DIS3L2Q8IYB7 885 aaKnown RBP22.93■■□□□ 1.26
USP53-203ENST00000507597 NAP1L4Q99733 375 aaKnown RBP22.93■■□□□ 1.26
USP53-203ENST00000507597 NR3C2P08235 984 aa22.92■■□□□ 1.26
USP53-203ENST00000507597 EIF2AK2P19525 551 aaKnown RBP22.92■■□□□ 1.26
USP53-203ENST00000507597 NONOQ15233 471 aaKnown RBP eCLIP22.92■■□□□ 1.26
USP53-203ENST00000507597 SLC9C1Q4G0N8 1177 aa22.92■■□□□ 1.26
USP53-203ENST00000507597 PDCD2LQ9BRP1 358 aa22.92■■□□□ 1.26
USP53-203ENST00000507597 ABHD16BQ9H3Z7 469 aa22.92■■□□□ 1.26
USP53-203ENST00000507597 RBM19Q9Y4C8 960 aaKnown RBP22.92■■□□□ 1.26
USP53-203ENST00000507597 PTCH2Q9Y6C5 1203 aa22.92■■□□□ 1.26
USP53-203ENST00000507597 DTNBO60941 627 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 EIF3JO75822 258 aaKnown RBP22.91■■□□□ 1.26
USP53-203ENST00000507597 GUCY1B3Q02153 619 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 PGM5Q15124 567 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 GNPTABQ3T906 1256 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 MCTP1Q6DN14 999 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 ARMCX2Q7L311 632 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 MORC4Q8TE76 937 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 TSHZ2Q9NRE2 1034 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 COL20A1Q9P218 1284 aa22.91■■□□□ 1.26
USP53-203ENST00000507597 RBBP6Q7Z6E9 1792 aaKnown RBP22.91■■□□□ 1.26
USP53-203ENST00000507597 CASP8AP2Q9UKL3 1982 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 FRMPD4Q14CM0 1322 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 PCNTO95613 3336 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 ZNF76P36508 570 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 USP11P51784 963 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 CAP1Q01518 475 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 PCNX4Q63HM2 1172 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 KCNV1Q6PIU1 500 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 VSIG10LQ86VR7 867 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 SPRYD3Q8NCJ5 442 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 VTA1Q9NP79 307 aa22.9■■□□□ 1.26
USP53-203ENST00000507597 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.9■■□□□ 1.26
USP53-203ENST00000507597 SMCHD1A6NHR9 2005 aa22.89■■□□□ 1.26
USP53-203ENST00000507597 RPTORQ8N122 1335 aa22.89■■□□□ 1.26
USP53-203ENST00000507597 ZNFX1Q9P2E3 1918 aaKnown RBP22.89■■□□□ 1.25
USP53-203ENST00000507597 VPS37CA5D8V6 355 aaPredicted RBP22.89■■□□□ 1.25
USP53-203ENST00000507597 BTBD18B2RXH4 712 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 MYCLP12524 364 aaPredicted RBP22.89■■□□□ 1.25
USP53-203ENST00000507597 EDNRBP24530 442 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 SREBF1P36956 1147 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 COL13A1Q5TAT6 717 aaPredicted RBP22.89■■□□□ 1.25
USP53-203ENST00000507597 NLRX1Q86UT6 975 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 CDHR1Q96JP9 859 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 GJB4Q9NTQ9 266 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 TMEM260Q9NX78 707 aa22.89■■□□□ 1.25
USP53-203ENST00000507597 NOL7Q9UMY1 257 aaKnown RBP22.89■■□□□ 1.25
USP53-203ENST00000507597 M0R2N6 131 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 MAFGO15525 162 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 STX6O43752 255 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 SYT1P21579 422 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 CCL14Q16627 93 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 TRIB2Q92519 343 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 SHISA4Q96DD7 197 aa22.88■■□□□ 1.25
USP53-203ENST00000507597 PURBQ96QR8 312 aaKnown RBP22.88■■□□□ 1.25
USP53-203ENST00000507597 CYP3A4P08684 503 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 ARHGAP4P98171 946 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 ACVR2BQ13705 512 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 NPY5RQ15761 445 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 PIK3AP1Q6ZUJ8 805 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 RASGRP4Q8TDF6 673 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 TBCKQ8TEA7 893 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 FGD4Q96M96 766 aa22.87■■□□□ 1.25
USP53-203ENST00000507597 DOCK3Q8IZD9 2030 aa22.86■■□□□ 1.25
USP53-203ENST00000507597 ELNP15502 786 aa22.86■■□□□ 1.25
USP53-203ENST00000507597 U2AF2P26368 475 aaKnown RBP eCLIP22.86■■□□□ 1.255e-8■■■■■ 34.6
USP53-203ENST00000507597 CYP2C19P33261 490 aa22.86■■□□□ 1.25
USP53-203ENST00000507597 BRAPQ7Z569 592 aa22.86■■□□□ 1.25
USP53-203ENST00000507597 NEK8Q86SG6 692 aa22.86■■□□□ 1.25
USP53-203ENST00000507597 NOSTRINQ8IVI9 506 aa22.86■■□□□ 1.25
USP53-203ENST00000507597 ZSCAN16Q9H4T2 348 aaPredicted RBP22.86■■□□□ 1.25
USP53-203ENST00000507597 HMX1Q9NP08 348 aaPredicted RBP22.86■■□□□ 1.25
USP53-203ENST00000507597 FLRT1Q9NZU1 646 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms