RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 COL6A1P12109 1028 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 CYP2B6P20813 491 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 COL9A3Q14050 684 aaPredicted RBP10.6□□□□□ -0.71
PTPN20-215ENST00000505814 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
PTPN20-215ENST00000505814 RUFY2Q8WXA3 655 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 MAML3Q96JK9 1138 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 ZSWIM5Q9P217 1185 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 NRBP1Q9UHY1 535 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 PRR12Q9ULL5 1215 aa10.6□□□□□ -0.71
PTPN20-215ENST00000505814 ASTN1O14525 1302 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 WDR19Q8NEZ3 1342 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 SMCHD1A6NHR9 2005 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 B4E1Z4 1266 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 TMEM232C9JQI7 657 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 MCCP23508 829 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 SLC1A4P43007 532 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 ANTXR2P58335 489 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 PDE4DQ08499 809 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 NECTIN1Q15223 517 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 SNRNP48Q6IEG0 339 aaKnown RBP10.59□□□□□ -0.71
PTPN20-215ENST00000505814 LYPD8Q6UX82 237 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 MAMDC4Q6UXC1 1216 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 CYB5R4Q7L1T6 521 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 MB21D2Q8IYB1 491 aaPredicted RBP10.59□□□□□ -0.71
PTPN20-215ENST00000505814 MSL3Q8N5Y2 521 aaKnown RBP10.59□□□□□ -0.71
PTPN20-215ENST00000505814 BAP1Q92560 729 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 KATNBL1Q9H079 304 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 CNNM2Q9H8M5 875 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 SENP2Q9HC62 589 aa10.59□□□□□ -0.71
PTPN20-215ENST00000505814 TNKSO95271 1327 aa10.58□□□□□ -0.71
PTPN20-215ENST00000505814 FCER1AP12319 257 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 CCND3P30281 292 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-215ENST00000505814 GHRHRQ02643 423 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 TKFCQ3LXA3 575 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 CCDC178Q5BJE1 867 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 KCTD1Q719H9 257 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 FAM133AQ8N9E0 248 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 CHST13Q8NET6 341 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 CHURC1Q8WUH1 139 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 MTMR8Q96EF0 704 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 DEFB118Q96PH6 123 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 ZSCAN10Q96SZ4 725 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-215ENST00000505814 MTA3Q9BTC8 594 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 KRT23Q9C075 422 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 HMX1Q9NP08 348 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-215ENST00000505814 RBM8AQ9Y5S9 174 aaKnown RBP10.58□□□□□ -0.72
PTPN20-215ENST00000505814 WASF2Q9Y6W5 498 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 IVNS1ABPQ9Y6Y0 642 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 PFASO15067 1338 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 SYNGAP1Q96PV0 1343 aa10.58□□□□□ -0.72
PTPN20-215ENST00000505814 E7EWF7 191 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 ZBED4O75132 1171 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 ICAM1P05362 532 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 CYP2C19P33261 490 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 RRP12Q5JTH9 1297 aaKnown RBP10.57□□□□□ -0.72
PTPN20-215ENST00000505814 GPATCH4Q5T3I0 446 aaKnown RBP10.57□□□□□ -0.72
PTPN20-215ENST00000505814 SYDE2Q5VT97 1194 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 TTBK2Q6IQ55 1244 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 NCAPG2Q86XI2 1143 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 PNMA1Q8ND90 353 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 MORC4Q8TE76 937 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 KCNB2Q92953 911 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 MMP19Q99542 508 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 MAF1Q9H063 256 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
PTPN20-215ENST00000505814 A1CFQ9NQ94 594 aaKnown RBP10.57□□□□□ -0.72
PTPN20-215ENST00000505814 FBXO40Q9UH90 709 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 CEP290O15078 2479 aa10.57□□□□□ -0.72
PTPN20-215ENST00000505814 LAMA3Q16787 3333 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 MCM3APO60318 1980 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 FARP2O94887 1054 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-215ENST00000505814 ZNF865P0CJ78 1059 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-215ENST00000505814 CTHP32929 405 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 NKX3-2P78367 333 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 TROAPQ12815 778 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 TSGA10IPQ3SY00 556 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 IQCA1Q86XH1 822 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 ZNF511Q8NB15 262 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 CLEC4DQ8WXI8 215 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 AGBL1Q96MI9 1066 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 ZKSCAN3Q9BRR0 538 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 TINF2Q9BSI4 451 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 SLC24A3Q9HC58 644 aa10.56□□□□□ -0.72
PTPN20-215ENST00000505814 LOC102724159A0A0B4J2E5 919 aa10.55□□□□□ -0.72
PTPN20-215ENST00000505814 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
PTPN20-215ENST00000505814 CFAP99D6REC4 459 aa10.55□□□□□ -0.72
PTPN20-215ENST00000505814 SLC27A2O14975 620 aa10.55□□□□□ -0.72
PTPN20-215ENST00000505814 SEPT4O43236 478 aa10.55□□□□□ -0.72
PTPN20-215ENST00000505814 MSCO60682 206 aa10.55□□□□□ -0.72
PTPN20-215ENST00000505814 CDC45O75419 566 aa10.55□□□□□ -0.72
PTPN20-215ENST00000505814 SNAI1O95863 264 aaPredicted RBP10.55□□□□□ -0.72
PTPN20-215ENST00000505814 MYCP01106 439 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms