RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 ARHGEF16Q5VV41 709 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 TEX2Q8IWB9 1127 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 TRPV1Q8NER1 839 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 AIFM3Q96NN9 605 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 LLPHQ9BRT6 129 aaKnown RBP26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 GLT8D2Q9H1C3 349 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 PXMP2Q9NR77 195 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 DDX49Q9Y6V7 483 aaKnown RBP26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 HTTP42858 3142 aa26.33■■□□□ 1.81
SPOCK1-204ENST00000505690 B4DLN1 442 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 FDPSP14324 419 aaKnown RBP26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 UBE2SQ16763 222 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 WASF1Q92558 559 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 SHISA4Q96DD7 197 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 ZMYND12Q9H0C1 365 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 RNF208Q9H0X6 261 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 C6orf50Q9HD87 102 aa26.32■■□□□ 1.8
SPOCK1-204ENST00000505690 EIF2AK2P19525 551 aaKnown RBP26.31■■□□□ 1.8
SPOCK1-204ENST00000505690 EDNRBP24530 442 aa26.31■■□□□ 1.8
SPOCK1-204ENST00000505690 IWS1Q96ST2 819 aa26.31■■□□□ 1.8
SPOCK1-204ENST00000505690 ABHD16BQ9H3Z7 469 aa26.31■■□□□ 1.8
SPOCK1-204ENST00000505690 MCM3APO60318 1980 aa26.31■■□□□ 1.8
SPOCK1-204ENST00000505690 ZNF865P0CJ78 1059 aaPredicted RBP26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 CNGA1P29973 690 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 GNA11P29992 359 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 PDE4DQ08499 809 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 ACVR2BQ13705 512 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 TMEM106CQ9BVX2 250 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 KATNBL1Q9H079 304 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 PAK6Q9NQU5 681 aaPredicted RBP26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 ZHX1Q9UKY1 873 aaPredicted RBP26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 LRRC37A2A6NM11 1700 aa26.3■■□□□ 1.8
SPOCK1-204ENST00000505690 CCDC85CA6NKD9 419 aa26.29■■□□□ 1.8
SPOCK1-204ENST00000505690 NLRP5P59047 1200 aa26.29■■□□□ 1.8
SPOCK1-204ENST00000505690 FAM177A1Q8N128 213 aaPredicted RBP26.29■■□□□ 1.8
SPOCK1-204ENST00000505690 PDCD2LQ9BRP1 358 aa26.29■■□□□ 1.8
SPOCK1-204ENST00000505690 ALG1Q9BT22 464 aa26.29■■□□□ 1.8
SPOCK1-204ENST00000505690 SPDYE3A6NKU9 549 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 NR3C2P08235 984 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 XBP1P17861 261 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 PGM5Q15124 567 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 EEPD1Q7L9B9 569 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 VTA1Q9NP79 307 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 FRMPD4Q14CM0 1322 aa26.28■■□□□ 1.8
SPOCK1-204ENST00000505690 SEPT4O43236 478 aa26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 CLK2P49760 499 aaKnown RBP26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 HMGN5P82970 282 aaKnown RBP26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 FBXO16Q8IX29 292 aaPredicted RBP26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 BICD2Q8TD16 824 aa26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 PCDHA6Q9UN73 950 aa26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 PCDHA8Q9Y5H6 950 aa26.27■■□□□ 1.8
SPOCK1-204ENST00000505690 FOSP01100 380 aaPredicted RBP26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 GJB1P08034 283 aa26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 AP3B2Q13367 1082 aa26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 STXBP2Q15833 593 aa26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 IL31RAQ8NI17 732 aa26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 DEFB118Q96PH6 123 aa26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 TMEM260Q9NX78 707 aa26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 DDX20Q9UHI6 824 aaKnown RBP26.26■■□□□ 1.79
SPOCK1-204ENST00000505690 ADAMTS3O15072 1205 aa26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 MYCLP12524 364 aaPredicted RBP26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 AKR1A1P14550 325 aa26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 REXO1Q8N1G1 1221 aaKnown RBP26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 SNX21Q969T3 373 aa26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 EHMT1Q9H9B1 1298 aa26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 FAM184BQ9ULE4 1060 aa26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 PCDHA4Q9UN74 947 aa26.25■■□□□ 1.79
SPOCK1-204ENST00000505690 MSCO60682 206 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 CCND2P30279 289 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 CCDC144BQ3MJ40 725 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 JAKMIP3Q5VZ66 844 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 MCTP2Q6DN12 878 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 GALNT17Q6IS24 598 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 TAPT1Q6NXT6 567 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 VSIG10LQ86VR7 867 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 DAGLBQ8NCG7 672 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 PGBD1Q96JS3 809 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 PHF20Q9BVI0 1012 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 ANO3Q9BYT9 981 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 GJB4Q9NTQ9 266 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 KCNJ14Q9UNX9 436 aa26.24■■□□□ 1.79
SPOCK1-204ENST00000505690 EIF3JO75822 258 aaKnown RBP26.23■■□□□ 1.79
SPOCK1-204ENST00000505690 FAM184AQ8NB25 1140 aa26.23■■□□□ 1.79
SPOCK1-204ENST00000505690 U2AF1L4Q8WU68 220 aaKnown RBP26.23■■□□□ 1.79
SPOCK1-204ENST00000505690 PDGFCQ9NRA1 345 aa26.23■■□□□ 1.79
SPOCK1-204ENST00000505690 POTEFA5A3E0 1075 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 K7ELQ4 463 aaPredicted RBP26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 SGPL1O95470 568 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 ADCYAP1R1P41586 468 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 GJA8P48165 433 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 CUL4AQ13619 759 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 NPY5RQ15761 445 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 ANO1Q5XXA6 986 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 PCNX4Q63HM2 1172 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 LHX8Q68G74 356 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 BLIDQ8IZY5 108 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 RASGRP4Q8TDF6 673 aa26.22■■□□□ 1.79
SPOCK1-204ENST00000505690 RBM47A0AV96 593 aaKnown RBP26.21■■□□□ 1.79
SPOCK1-204ENST00000505690 FOSBP53539 338 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms