RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 C1orf159Q96HA4 380 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 BTG4Q9NY30 223 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 MAGEC2Q9UBF1 373 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 EBF1Q9UH73 591 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 PCDHA9Q9Y5H5 950 aa6.96□□□□□ -1.3
TRAPPC13-205ENST00000504243 CARMIL2Q6F5E8 1435 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 ASXL2Q76L83 1435 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 FGF10O15520 208 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 MYO1BO43795 1136 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 PDE8AO60658 829 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 CRTAMO95727 393 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 FLT3P36888 993 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 ACBD5Q5T8D3 534 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 CYP2R1Q6VVX0 501 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 FGD2Q7Z6J4 655 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 GPATCH3Q96I76 525 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 SP110Q9HB58 689 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 PCDHA8Q9Y5H6 950 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 PCDHA2Q9Y5H9 948 aa6.95□□□□□ -1.3
TRAPPC13-205ENST00000504243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQ27 194 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQ64 194 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQC6 194 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQD8 194 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 NRDCO43847 1150 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 RASGRP1O95267 797 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 LCP1P13796 627 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 NAT1P18440 290 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 TRIM61Q5EBN2 209 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 CEP128Q6ZU80 1094 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 CCDC103Q8IW40 242 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 UBR7Q8N806 425 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 HHIPL1Q96JK4 782 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 FMNL2Q96PY5 1086 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 ALG1Q9BT22 464 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 C19orf44Q9H6X5 657 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 GPR27Q9NS67 375 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 ERVK13-1Q9NX77 482 aa6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 TNPO3Q9Y5L0 923 aaKnown RBP6.94□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQ45 241 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 A0A1W2PQY0 241 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 WTIPA6NIX2 430 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 FADS2P1A8MWK0 482 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 NPHS1O60500 1241 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 DNAJC8O75937 253 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 ASLP04424 464 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 TRHRP34981 398 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 SOX5P35711 763 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 RTP1P59025 263 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 GPR85P60893 370 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 GALNT18Q6P9A2 607 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 MPZL3Q6UWV2 235 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 RSPO2Q6UXX9 243 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 UBE2R2Q712K3 238 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 ZC3H7AQ8IWR0 971 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 GSTCDQ8NEC7 633 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 MMP19Q99542 508 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 ZFYVE21Q9BQ24 234 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 TARS2Q9BW92 718 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 TRIM39Q9HCM9 518 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 PCDH12Q9NPG4 1184 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 INTS7Q9NVH2 962 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 GPR160Q9UJ42 338 aa6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-205ENST00000504243 ZNF503-AS2A6NEH8 195 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 MSCO60682 206 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 JMJD7P0C870 316 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 IGFALSP35858 605 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 TXKP42681 527 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 ZNF460Q14592 562 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 INF2Q27J81 1249 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 CFAP100Q494V2 611 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 AHI1Q8N157 1196 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 RCBTB1Q8NDN9 531 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 SCLYQ96I15 445 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 CAAP1Q9H8G2 361 aa6.92□□□□□ -1.3
TRAPPC13-205ENST00000504243 B4E1Z4 1266 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 KCNQ2O43526 872 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 PSPNO60542 156 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 KPNA6O60684 536 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 RPL11P62913 178 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 RBM10P98175 930 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 TIGD5Q53EQ6 642 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 THNSL2Q86YJ6 484 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 PPM1KQ8N3J5 372 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 USP33Q8TEY7 942 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 RNF32Q9H0A6 362 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 SLC6A17Q9H1V8 727 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 TIMM13Q9Y5L4 95 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-205ENST00000504243 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms