RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NR2F2P24468 414 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 NLRP10Q86W26 655 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 PLCD3Q8N3E9 789 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 MMS19Q96T76 1030 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 THAP12O43422 761 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 ATF2P15336 505 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 DYNLL1P63167 89 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 PPARDQ03181 441 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 POMGNT1Q8WZA1 660 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 OSBP2Q969R2 916 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 BBOX1O75936 387 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 PSMC2P35998 433 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 RASSF7Q02833 373 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 PPP2R5AQ15172 486 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 MAN2A1Q16706 1144 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 CAPS2Q9BXY5 557 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 MADDQ8WXG6 1647 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 LRRIQ4A6NIV6 560 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 PRPF3O43395 683 aaKnown RBP18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 EHHADHQ08426 723 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 ATP6V0A1Q93050 837 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 MED10Q9BTT4 135 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 WDR11Q9BZH6 1224 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 SUGCTQ9HAC7 445 aa18.06■□□□□ 0.48
PCDHA1-203ENST00000504120 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 TMOD1P28289 359 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 NT5C2P49902 561 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 C11orf57Q6ZUT1 292 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 PPP4R1Q8TF05 950 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 NT5C1BQ96P26 610 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 NUF2Q9BZD4 464 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 PUS7LQ9H0K6 701 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 SEC31BQ9NQW1 1179 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 HEG1Q9ULI3 1381 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 CAPN9O14815 690 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 RNF8O76064 485 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 LIFRP42702 1097 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 BFSP1Q12934 665 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 EPSTI1Q96J88 318 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 MAN1B1Q9UKM7 699 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 AFG3L2Q9Y4W6 797 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 ERBB3P21860 1342 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 AFPP02771 609 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 FKBP3Q00688 224 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 RBL2Q08999 1139 aa18.05■□□□□ 0.48
PCDHA1-203ENST00000504120 PIK3CAP42336 1068 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 SLC35F6Q8N357 371 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 ENOX1Q8TC92 643 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 RASGRP4Q8TDF6 673 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 TBCKQ8TEA7 893 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 TRIM11Q96F44 468 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 ZNF577Q9BSK1 485 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 NRBP1Q9UHY1 535 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 VPS41P49754 854 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 RNF10Q8N5U6 811 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 RWDD2AQ9UIY3 292 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 FAM170AA1A519 330 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 CASQ2O14958 399 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 ATP8B1O43520 1251 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 LMNB2Q03252 620 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 TFDP1Q14186 410 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 ANKRD13CQ8N6S4 541 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 GSDMBQ8TAX9 411 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 ZNF277Q9NRM2 450 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 GUCY2DQ02846 1103 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 PTPROQ16827 1216 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 CSRNP1Q96S65 589 aa18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-203ENST00000504120 CLNS1AP54105 237 aaKnown RBP18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 ERFEQ4G0M1 354 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 SIRT2Q8IXJ6 389 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 FAM81BQ96LP2 452 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 RAB3IPQ96QF0 476 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 SERPINB13Q9UIV8 391 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 PHLPP2Q6ZVD8 1323 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 HNRNPDLO14979 420 aaKnown RBP18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 PRKAB2O43741 272 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 SEPT2Q15019 361 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 CCDC38Q502W7 563 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 ZNF148Q9UQR1 794 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 CPSF1Q10570 1443 aaKnown RBP18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 MYO1FO00160 1098 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 PSMD6Q15008 389 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 NECTIN1Q15223 517 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 NCAPG2Q86XI2 1143 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 RPAP1Q9BWH6 1393 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 RESTQ13127 1097 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 PPP2R5CQ13362 524 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 GADL1Q6ZQY3 521 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 FAM186BQ8IYM0 893 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
PCDHA1-203ENST00000504120 ADAT2Q7Z6V5 191 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms