RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 CCDC34Q96HJ3 373 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 MROH8Q9H579 483 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
SGCA-204ENST00000504073 RBBP6Q7Z6E9 1792 aaKnown RBP17.12■□□□□ 0.33
SGCA-204ENST00000504073 A0A1W2PQ27 194 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 A0A1W2PQ64 194 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 A0A1W2PQD8 194 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 TRAK2O60296 914 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 NEMFO60524 1076 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 SREBF1P36956 1147 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 SOX10P56693 466 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 NBR1Q14596 966 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 KLHL40Q2TBA0 621 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 CLEC4DQ8WXI8 215 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
SGCA-204ENST00000504073 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
SGCA-204ENST00000504073 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 FAM205CA6NFA0 338 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
SGCA-204ENST00000504073 TXLNAP40222 546 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 PRPHP41219 470 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
SGCA-204ENST00000504073 NOGQ13253 232 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 PTGDRQ13258 359 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 PTPAQ15257 358 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
SGCA-204ENST00000504073 XRRA1Q6P2D8 792 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
SGCA-204ENST00000504073 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
SGCA-204ENST00000504073 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
SGCA-204ENST00000504073 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
SGCA-204ENST00000504073 NFIBO00712 420 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 OPLAHO14841 1288 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 ALDH1A1P00352 501 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 CYP3A4P08684 503 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 PTPREP23469 700 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
SGCA-204ENST00000504073 MAP2K2P36507 400 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
SGCA-204ENST00000504073 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 ERVK-24P63145 666 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 KCTD2Q14681 263 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 PRPF38BQ5VTL8 546 aaKnown RBP17.09■□□□□ 0.33
SGCA-204ENST00000504073 DTHD1Q6ZMT9 781 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 MRPS27Q92552 414 aaKnown RBP17.09■□□□□ 0.33
SGCA-204ENST00000504073 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
SGCA-204ENST00000504073 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
SGCA-204ENST00000504073 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
SGCA-204ENST00000504073 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
SGCA-204ENST00000504073 CA12O43570 354 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.32
SGCA-204ENST00000504073 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.32
SGCA-204ENST00000504073 CALCRLQ16602 461 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 ARHGEF16Q5VV41 709 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 SYTL5Q8TDW5 730 aaPredicted RBP17.08■□□□□ 0.32
SGCA-204ENST00000504073 NSUN6Q8TEA1 469 aaKnown RBP17.08■□□□□ 0.32
SGCA-204ENST00000504073 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 ZFYVE28Q9HCC9 887 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 BTBD7Q9P203 1132 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 STK24Q9Y6E0 443 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 IVNS1ABPQ9Y6Y0 642 aa17.08■□□□□ 0.32
SGCA-204ENST00000504073 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 TBX3O15119 743 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 STAM2O75886 525 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 CYP2C8P10632 490 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 CMA1P23946 247 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 CYP3A7P24462 503 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 CIITAP33076 1130 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
SGCA-204ENST00000504073 BAATQ14032 418 aaPredicted RBP17.07■□□□□ 0.32
SGCA-204ENST00000504073 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
SGCA-204ENST00000504073 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 DNERQ8NFT8 737 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 AK8Q96MA6 479 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 MOV10L1Q9BXT6 1211 aaKnown RBP17.07■□□□□ 0.32
SGCA-204ENST00000504073 RBPJLQ9UBG7 517 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 MORF4L1Q9UBU8 362 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
SGCA-204ENST00000504073 KINO60870 393 aaKnown RBP17.06■□□□□ 0.32
SGCA-204ENST00000504073 FCER1AP12319 257 aa17.06■□□□□ 0.32
SGCA-204ENST00000504073 ERCC3P19447 782 aa17.06■□□□□ 0.32
SGCA-204ENST00000504073 CCND2P30279 289 aa17.06■□□□□ 0.32
SGCA-204ENST00000504073 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms