RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 RAD17O75943 681 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 TDP2O95551 362 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 PLCG1P19174 1290 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 TECP42680 631 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 TNNI2P48788 182 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 CALCRLQ16602 461 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 MYRIPQ8NFW9 859 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 CSRNP1Q96S65 589 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 GMLQ99445 158 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 TMOD2Q9NZR1 351 aa12.99□□□□□ -0.33
USP46-204ENST00000503060 A0A1B0GTH6 734 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 PSMD14O00487 310 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 SLC37A4O43826 429 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 VIL1P09327 827 aaKnown RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 TBX2Q13207 712 aaPredicted RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 KCNB1Q14721 858 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 NR1I3Q14994 352 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 PROCA1Q8NCQ7 364 aaPredicted RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 GMCL1P1Q8NEA9 526 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 RWDD2AQ9UIY3 292 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 COL4A5P29400 1685 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 F5H6K3 240 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 KLRC4O43908 158 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 GH2P01242 217 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 TNNT1P13805 278 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 TXKP42681 527 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 KCNJ6P48051 423 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 JAG1P78504 1218 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 KLRC3Q07444 240 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 PAK1Q13153 545 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 RRP1BQ14684 758 aaKnown RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 CDC37Q16543 378 aaPredicted RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 RNF217Q8TC41 542 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 MMTAG2Q9BU76 263 aaKnown RBP12.98□□□□□ -0.33
USP46-204ENST00000503060 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
USP46-204ENST00000503060 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
USP46-204ENST00000503060 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 NELFBQ8WX92 580 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
USP46-204ENST00000503060 HERC5Q9UII4 1024 aaKnown RBP12.97□□□□□ -0.33
USP46-204ENST00000503060 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
USP46-204ENST00000503060 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 CLRN2A0PK11 232 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 NDUFB10O96000 172 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 TMEM266Q2M3C6 531 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 SPECC1LQ69YQ0 1117 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 CCDC97Q96F63 343 aaPredicted RBP12.97□□□□□ -0.33
USP46-204ENST00000503060 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 PCDHA1Q9Y5I3 950 aa12.97□□□□□ -0.33
USP46-204ENST00000503060 PRCPP42785 496 aa12.96□□□□□ -0.33
USP46-204ENST00000503060 E4F1Q66K89 784 aaPredicted RBP12.96□□□□□ -0.33
USP46-204ENST00000503060 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
USP46-204ENST00000503060 CALML4Q96GE6 196 aa12.96□□□□□ -0.33
USP46-204ENST00000503060 CTAGE1Q96RT6 745 aa12.96□□□□□ -0.33
USP46-204ENST00000503060 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.33
USP46-204ENST00000503060 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
USP46-204ENST00000503060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
USP46-204ENST00000503060 TRMT1Q9NXH9 659 aaKnown RBP12.96□□□□□ -0.33
USP46-204ENST00000503060 LRWD1Q9UFC0 647 aa12.96□□□□□ -0.33
USP46-204ENST00000503060 COBLO75128 1261 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 STK10O94804 968 aaKnown RBP12.96□□□□□ -0.34
USP46-204ENST00000503060 RHOBTB3O94955 611 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 PARNO95453 639 aaKnown RBP12.96□□□□□ -0.34
USP46-204ENST00000503060 BDNFP23560 247 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 GOLGA8FQ08AF8 430 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 GOLGA8DPQ0D2H9 430 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 NYAP1Q6ZVC0 841 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 OGFOD1Q8N543 542 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 FAM151AQ8WW52 585 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 C7orf25Q9BPX7 421 aa12.96□□□□□ -0.34
USP46-204ENST00000503060 ADD3Q9UEY8 706 aaKnown RBP12.96□□□□□ -0.34
USP46-204ENST00000503060 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
USP46-204ENST00000503060 DYNC1I1O14576 645 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
USP46-204ENST00000503060 GRB10Q13322 594 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 PDIA5Q14554 519 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 DDX25Q9UHL0 483 aaKnown RBP12.95□□□□□ -0.34
USP46-204ENST00000503060 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
USP46-204ENST00000503060 USP17L15C9J2P7 530 aa12.94□□□□□ -0.34
USP46-204ENST00000503060 USP17L13C9JLJ4 530 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms