RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 SCLYQ96I15 445 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 MTG1Q9BT17 334 aaPredicted RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 SEZ6LQ9BYH1 1024 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 KRT23Q9C075 422 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 WNT8AQ9H1J5 351 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 IL25Q9H293 177 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 ALDH8A1Q9H2A2 487 aaPredicted RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 MTIF3Q9H2K0 278 aaKnown RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 ABCB11O95342 1321 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 SCN10AQ9Y5Y9 1956 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
LSAMP-206ENST00000498645 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 EDNRBP24530 442 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 IFIT1BQ5T764 474 aaKnown RBP12.89□□□□□ -0.35
LSAMP-206ENST00000498645 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 COL25A1Q9BXS0 654 aaPredicted RBP12.89□□□□□ -0.35
LSAMP-206ENST00000498645 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
LSAMP-206ENST00000498645 SUPT16HQ9Y5B9 1047 aaKnown RBP12.89□□□□□ -0.35
LSAMP-206ENST00000498645 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
LSAMP-206ENST00000498645 ARIH2O95376 493 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
LSAMP-206ENST00000498645 PDE4AP27815 886 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 NT5C2P49902 561 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
LSAMP-206ENST00000498645 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 TTC22Q5TAA0 569 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 CHST3Q7LGC8 479 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
LSAMP-206ENST00000498645 PPM1EQ8WY54 764 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 HERVK_113Q902F9 699 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 TAAR1Q96RJ0 339 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
LSAMP-206ENST00000498645 TANC1Q9C0D5 1861 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 EIF2AK2P19525 551 aaKnown RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 RAB30Q15771 203 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 RPUSD2Q8IZ73 545 aaKnown RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 RGS22Q8NE09 1264 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 RMDN3Q96TC7 470 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 NOD1Q9Y239 953 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 MYH7BA7E2Y1 1941 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 BAZ2BQ9UIF8 2168 aaKnown RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
LSAMP-206ENST00000498645 CHD7Q9P2D1 2997 aa12.87□□□□□ -0.35
LSAMP-206ENST00000498645 KLRF2D3W0D1 207 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 CFBP00751 764 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 RABGGTBP53611 331 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 TRDNQ13061 729 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 STAG2Q8N3U4 1231 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 AFG1LQ8WV93 481 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 VCANP13611 3396 aa12.86□□□□□ -0.35
LSAMP-206ENST00000498645 A6NJR5 290 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 KPNA6O60684 536 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 GH1P01241 217 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 SEC23AQ15436 765 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 STXBP2Q15833 593 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 RUFY2Q8WXA3 655 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 AMNQ9BXJ7 453 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 SLC28A3Q9HAS3 691 aa12.85□□□□□ -0.35
LSAMP-206ENST00000498645 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
LSAMP-206ENST00000498645 ERICH2A1L162 156 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 SORBS3O60504 671 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 MMP3P08254 477 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 CYP21A2P08686 494 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 MYOGP15173 224 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 IGFBP4P22692 258 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 PTH1RQ03431 593 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 ARHGAP1Q07960 439 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
LSAMP-206ENST00000498645 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
LSAMP-206ENST00000498645 PXMP2Q9NR77 195 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
LSAMP-206ENST00000498645 PCDHA1Q9Y5I3 950 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms