RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 BICD2Q8TD16 824 aa22.61■■□□□ 1.21
ACTN4-208ENST00000497637 GAS2L1Q99501 681 aaPredicted RBP22.61■■□□□ 1.21
ACTN4-208ENST00000497637 SPZ1Q9BXG8 430 aa22.61■■□□□ 1.21
ACTN4-208ENST00000497637 ZNF576Q9H609 170 aa22.61■■□□□ 1.21
ACTN4-208ENST00000497637 PDLIM7Q9NR12 457 aa22.61■■□□□ 1.21
ACTN4-208ENST00000497637 SH3GLB2Q9NR46 395 aa22.61■■□□□ 1.21
ACTN4-208ENST00000497637 DDX19AQ9NUU7 478 aaKnown RBP22.61■■□□□ 1.21
ACTN4-208ENST00000497637 hCG_1642624A0A1W2PR95 340 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 SLC15A5A6NIM6 579 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 HOXC6P09630 235 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 DNAJB2P25686 324 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 KRT2P35908 639 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 CERKLQ49MI3 558 aaPredicted RBP22.6■■□□□ 1.21
ACTN4-208ENST00000497637 TPRNQ4KMQ1 711 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 PAGR1Q9BTK6 254 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 TRIM34Q9BYJ4 488 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 GRPEL1Q9HAV7 217 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 PCDHA7Q9UN72 937 aa22.6■■□□□ 1.21
ACTN4-208ENST00000497637 KLRF2D3W0D1 207 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 PEX10O60683 326 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 SNHG28P0DPA3 235 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 SF3A1Q15459 793 aaKnown RBP22.59■■□□□ 1.21
ACTN4-208ENST00000497637 TRIM60Q495X7 471 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 GJC2Q5T442 439 aaPredicted RBP22.59■■□□□ 1.21
ACTN4-208ENST00000497637 ADALQ6DHV7 355 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 BRMS1Q9HCU9 246 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 GINM1Q9NU53 330 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 CLIP2Q9UDT6 1046 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 RABGAP1Q9Y3P9 1069 aa22.59■■□□□ 1.21
ACTN4-208ENST00000497637 TRIM43BA6NCK2 446 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 USP17L10C9JJH3 530 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 PPP6R2O75170 966 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 ME1P48163 572 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 PTPAQ15257 358 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 ASPRV1Q53RT3 343 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 RILPL1Q5EBL4 403 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 OXER1Q8TDS5 423 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 MKL1Q969V6 931 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 TRIM43Q96BQ3 446 aaPredicted RBP22.58■■□□□ 1.21
ACTN4-208ENST00000497637 FLRT1Q9NZU1 646 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 NYAP2Q9P242 653 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 IVNS1ABPQ9Y6Y0 642 aa22.58■■□□□ 1.21
ACTN4-208ENST00000497637 CYTH3O43739 400 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 PDHBP11177 359 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 CALML3P27482 149 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 NPY5RQ15761 445 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 USP17L2Q6R6M4 530 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 TNFRSF25Q93038 417 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 TIFAQ96CG3 184 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 CLSTN2Q9H4D0 955 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 KANSL2Q9H9L4 492 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 DACT1Q9NYF0 836 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 HCN4Q9Y3Q4 1203 aa22.57■■□□□ 1.2
ACTN4-208ENST00000497637 MPHOSPH10O00566 681 aaKnown RBP22.56■■□□□ 1.2
ACTN4-208ENST00000497637 XRCC6P12956 609 aaKnown RBP eCLIP22.56■■□□□ 1.2
ACTN4-208ENST00000497637 PTPREP23469 700 aa22.56■■□□□ 1.2
ACTN4-208ENST00000497637 TOB1P50616 345 aaPredicted RBP22.56■■□□□ 1.2
ACTN4-208ENST00000497637 NLRP5P59047 1200 aa22.56■■□□□ 1.2
ACTN4-208ENST00000497637 NR5A1Q13285 461 aa22.56■■□□□ 1.2
ACTN4-208ENST00000497637 RRP1BQ14684 758 aaKnown RBP22.56■■□□□ 1.2
ACTN4-208ENST00000497637 TMEM179Q6ZVK1 233 aa22.56■■□□□ 1.2
ACTN4-208ENST00000497637 NUP62CLQ9H1M0 184 aa22.56■■□□□ 1.2
ACTN4-208ENST00000497637 TSPY26PQ9H489 355 aa22.56■■□□□ 1.2
ACTN4-208ENST00000497637 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.56■■□□□ 1.2
ACTN4-208ENST00000497637 MORC2Q9Y6X9 1032 aaPredicted RBP22.56■■□□□ 1.2
ACTN4-208ENST00000497637 SIPA1L1O43166 1804 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 GOLGA8HP0CJ92 632 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 GALNT17Q6IS24 598 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 CCDC73Q6ZRK6 1079 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 SH3RF1Q7Z6J0 888 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 LRRC47Q8N1G4 583 aaKnown RBP22.55■■□□□ 1.2
ACTN4-208ENST00000497637 FSIP1Q8NA03 581 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 PPM1EQ8WY54 764 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 RIOX1Q9H6W3 641 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 MTMR7Q9Y216 660 aa22.55■■□□□ 1.2
ACTN4-208ENST00000497637 CYBAP13498 195 aa22.54■■□□□ 1.2
ACTN4-208ENST00000497637 CYP2C19P33261 490 aa22.54■■□□□ 1.2
ACTN4-208ENST00000497637 AXDND1Q5T1B0 1012 aaPredicted RBP22.54■■□□□ 1.2
ACTN4-208ENST00000497637 WDR78Q5VTH9 848 aa22.54■■□□□ 1.2
ACTN4-208ENST00000497637 DAGLBQ8NCG7 672 aa22.54■■□□□ 1.2
ACTN4-208ENST00000497637 ENGASEQ8NFI3 743 aa22.54■■□□□ 1.2
ACTN4-208ENST00000497637 MRPS27Q92552 414 aaKnown RBP22.54■■□□□ 1.2
ACTN4-208ENST00000497637 GOLPH3LQ9H4A5 285 aa22.54■■□□□ 1.2
ACTN4-208ENST00000497637 GREB1LQ9C091 1923 aaPredicted RBP22.54■■□□□ 1.2
ACTN4-208ENST00000497637 NR1I2O75469 434 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 CMA1P23946 247 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 TLE2Q04725 743 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 FPGSQ05932 587 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 ZNF543Q08ER8 600 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 GRB14Q14449 540 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 ABCB5Q2M3G0 1257 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 CLEC10AQ8IUN9 316 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 CCDC148Q8NFR7 591 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 PIBF1Q8WXW3 757 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 RRP36Q96EU6 259 aaKnown RBP22.53■■□□□ 1.2
ACTN4-208ENST00000497637 RBSNQ9H1K0 784 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 TSPYL2Q9H2G4 693 aaPredicted RBP22.53■■□□□ 1.2
ACTN4-208ENST00000497637 CABP5Q9NP86 173 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 MYH6P13533 1939 aa22.53■■□□□ 1.2
ACTN4-208ENST00000497637 FRMPD3Q5JV73 1810 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms