RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 DTNBO60941 627 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 GCFC2P16383 781 aaKnown RBP22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 EDNRBP24530 442 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 CIITAP33076 1130 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 RGS2P41220 211 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 GNL2Q13823 731 aaKnown RBP22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 RILPL1Q5EBL4 403 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 SLC30A10Q6XR72 485 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 TRIM47Q96LD4 638 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 RMDN3Q96TC7 470 aa22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 BIN2Q9UBW5 565 aaPredicted RBP22.54■■□□□ 1.2
SCAMP3-209ENST00000497470 IGHA2P01877 340 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 GUCY1B3Q02153 619 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 RESTQ13127 1097 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 NR5A1Q13285 461 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 WDR78Q5VTH9 848 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 PCNX4Q63HM2 1172 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 OLFML2BQ68BL8 750 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 NIPA1Q7RTP0 329 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 OXER1Q8TDS5 423 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 ZNF296Q8WUU4 475 aaPredicted RBP22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 PDCD2LQ9BRP1 358 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 PXMP2Q9NR77 195 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 COL20A1Q9P218 1284 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 MORC2Q9Y6X9 1032 aaPredicted RBP22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 MGAMO43451 1857 aa22.53■■□□□ 1.2
SCAMP3-209ENST00000497470 CYP3A7-CYP3A51PA0A087WV96 503 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 MAFGO15525 162 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 F13A1P00488 732 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 TAL1P17542 331 aaPredicted RBP22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 CYP3A7P24462 503 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 HOXA13P31271 388 aaPredicted RBP22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 UBE2SQ16763 222 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 PPP4R3AQ6IN85 833 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 DPP9Q86TI2 863 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 VSIG10LQ86VR7 867 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 TAAR1Q96RJ0 339 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 APBA2Q99767 749 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 NRBP1Q9UHY1 535 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 NOL7Q9UMY1 257 aaKnown RBP22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 ZNFX1Q9P2E3 1918 aaKnown RBP22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 PLXNB2O15031 1838 aa22.52■■□□□ 1.2
SCAMP3-209ENST00000497470 COBLO75128 1261 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 ALDH5A1P51649 535 aaPredicted RBP22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 ARHGEF16Q5VV41 709 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 JAKMIP3Q5VZ66 844 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 MCTP1Q6DN14 999 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 NEK8Q86SG6 692 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 MBOAT7Q96N66 472 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 SRRDQ9UH36 339 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 ZDHHC9Q9Y397 364 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 SYNGAP1Q96PV0 1343 aa22.51■■□□□ 1.19
SCAMP3-209ENST00000497470 SOWAHBA6NEL2 793 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 KIF28PB7ZC32 967 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 CTGFP29279 349 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 ARHGAP4P98171 946 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 PGM5Q15124 567 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 FCHSD1Q86WN1 690 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 TBCKQ8TEA7 893 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 FGD4Q96M96 766 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 CASP8AP2Q9UKL3 1982 aa22.5■■□□□ 1.19
SCAMP3-209ENST00000497470 ADAMTS3O15072 1205 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 EIF3JO75822 258 aaKnown RBP22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 BMP15O95972 392 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 NR3C2P08235 984 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 CTCFP49711 727 aaPredicted RBP22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 MYSM1Q5VVJ2 828 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 PIK3AP1Q6ZUJ8 805 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 PXYLP1Q8TE99 480 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 MAML3Q96JK9 1138 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 TMEM260Q9NX78 707 aa22.49■■□□□ 1.19
SCAMP3-209ENST00000497470 CCND2P30279 289 aa22.48■■□□□ 1.19
SCAMP3-209ENST00000497470 CNTN2Q02246 1040 aa22.48■■□□□ 1.19
SCAMP3-209ENST00000497470 STXBP2Q15833 593 aa22.48■■□□□ 1.19
SCAMP3-209ENST00000497470 RASGRP4Q8TDF6 673 aa22.48■■□□□ 1.19
SCAMP3-209ENST00000497470 DOCK3Q8IZD9 2030 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 PGK2P07205 417 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 FOSBP53539 338 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 PKP1Q13835 747 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 KCNV1Q6PIU1 500 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 CD99L2Q8TCZ2 262 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 CDHR1Q96JP9 859 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 INPP4AQ96PE3 977 aaPredicted RBP22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 UBIAD1Q9Y5Z9 338 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 ASTN1O14525 1302 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 LCTP09848 1927 aa22.47■■□□□ 1.19
SCAMP3-209ENST00000497470 LAD1O00515 517 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 TBX3O15119 743 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 TGFB3P10600 412 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 FLT3LGP49771 235 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 SETQ01105 290 aaPredicted RBP22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 INF2Q27J81 1249 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 Q4G0T1 1027 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 CEP55Q53EZ4 464 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 EARS2Q5JPH6 523 aaKnown RBP22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 GPRASP2Q96D09 838 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 ZNF396Q96N95 335 aaPredicted RBP22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 TINF2Q9BSI4 451 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 ARHGAP39Q9C0H5 1083 aa22.46■■□□□ 1.19
SCAMP3-209ENST00000497470 MEIS1O00470 390 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms