RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ADARP55265 1226 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 SGSM1Q2NKQ1 1148 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 RETREG2Q8NC44 543 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 MGARPQ8TDB4 240 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 TANGO6Q9C0B7 1094 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 DKK3Q9UBP4 350 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 SLC4A7Q9Y6M7 1214 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 KLF18A0A0U1RQI7 1052 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 FAM83GA6ND36 823 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF185O15231 689 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 HNRNPRO43390 633 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 PPP6R2O75170 966 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF24P17028 368 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 CXCR5P32302 372 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 MTTPP55157 894 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 NR1I3Q14994 352 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 P3H1Q32P28 736 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 TMEM259Q4ZIN3 620 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 RNF220Q5VTB9 566 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 CADPS2Q86UW7 1296 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 TMEM139Q8IV31 216 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 PDCD7Q8N8D1 485 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 RBBP8NLQ8NC74 664 aaPredicted RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 PIGOQ8TEQ8 1089 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ARHGEF1Q92888 912 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 TMBIM4Q9HC24 238 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 DMGDHQ9UI17 866 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 CLTCL1P53675 1640 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 SAMD9LQ8IVG5 1584 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ARHGAP10A1A4S6 786 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 TEX33O43247 280 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 PENKP01210 267 aaPredicted RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 CALB2P22676 271 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 EIF4BP23588 611 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 COPB1P53618 953 aaKnown RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 USP46P62068 366 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF268Q14587 947 aaPredicted RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 RCN1Q15293 331 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 FBXO31Q5XUX0 539 aaPredicted RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 CCDC110Q8TBZ0 833 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 SMC6Q96SB8 1091 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 CCDC8Q9H0W5 538 aaPredicted RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ALDH8A1Q9H2A2 487 aaPredicted RBP8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 PARVBQ9HBI1 364 aa8.93□□□□□ -0.98
CRNKL1-205ENST00000496549 ESYT3A0FGR9 886 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 PAK1Q13153 545 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 TOB2Q14106 344 aaPredicted RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 THOC7Q6I9Y2 204 aaKnown RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 USP33Q8TEY7 942 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 CCT6BQ92526 530 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 NDEL1Q9GZM8 345 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 CTNNAL1Q9UBT7 734 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 ARL2BPQ9Y2Y0 163 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 PTPRTO14522 1441 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 PSMA7O14818 248 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 ASAP2O43150 1006 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 ACTN4O43707 911 aaKnown RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 UBOX5O94941 541 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 CCDC15Q0P6D6 951 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 PHC3Q8NDX5 983 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 BHMTQ93088 406 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 RNPEPL1Q9HAU8 725 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 TMED5Q9Y3A6 229 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 A6NHS1 94 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 MCL1Q07820 350 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 DMPKQ09013 629 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 R3HDM1Q15032 1099 aaKnown RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 CCDC62Q6P9F0 684 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 FAM228AQ86W67 206 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 CD302Q8IX05 232 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 TSEN2Q8NCE0 465 aaKnown RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 PRCCQ92733 491 aaPredicted RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 LENG1Q96BZ8 264 aaPredicted RBP8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 SERTAD1Q9UHV2 236 aa8.92□□□□□ -0.98
CRNKL1-205ENST00000496549 KCNJ18B7U540 433 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 DKC1O60832 514 aaKnown RBP eCLIP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 IARSP41252 1262 aaKnown RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 PEX5P50542 639 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 LMNB2Q03252 620 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 DHX9Q08211 1270 aaKnown RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ITGB3BPQ13352 177 aaPredicted RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 KCNJ12Q14500 433 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 FYB2Q5VWT5 728 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF280DQ6N043 979 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 C6orf89Q6UWU4 347 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 NCCRP1Q6ZVX7 275 aaPredicted RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 STK32AQ8WU08 396 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 PCDH18Q9HCL0 1135 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 PHF24Q9UPV7 400 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ATP10DQ9P241 1426 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ITIH6Q6UXX5 1313 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 PREX2Q70Z35 1606 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ADCY3O60266 1144 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 UPP2O95045 317 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 IRX4P78413 519 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms