RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 AGBL1Q96MI9 1066 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 UIMC1Q96RL1 719 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 SLF1Q9BQI6 1058 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 CUEDC2Q9H467 287 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 NRBP1Q9UHY1 535 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 DACH1Q9UI36 760 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 CFBP00751 764 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 RPN1P04843 607 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 CIITAP33076 1130 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 FCHSD1Q86WN1 690 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 TEX2Q8IWB9 1127 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 TRMT44Q8IYL2 757 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 ENOX1Q8TC92 643 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 KLRC4O43908 158 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 ICAM1P05362 532 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 ERCC5P28715 1186 aaPredicted RBP15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 BACE1P56817 501 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 Q4G0T1 1027 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 PRR16Q569H4 304 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 C9orf131Q5VYM1 1079 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 ETNPPLQ8TBG4 499 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 ADARB2Q9NS39 739 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 PCDHA12Q9UN75 941 aa15.4■□□□□ 0.06
SPTBN1-205ENST00000496323 GCOM1H8Y6P7 765 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CYP3A4P08684 503 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 POLR2MP0CAP2 368 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 TPM4P67936 248 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 ECM1Q16610 540 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 ZNF280CQ8ND82 737 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CALML4Q96GE6 196 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 KCNF1Q9H3M0 494 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 MAGEF1Q9HAY2 307 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 PICK1Q9NRD5 415 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 BLOC1S4Q9NUP1 217 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 IFNKQ9P0W0 207 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 NFE2L3Q9Y4A8 694 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 ABCB11O95342 1321 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 PITPNM2Q9BZ72 1349 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 MYL1P05976 194 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 FANCCQ00597 558 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CCDC144BQ3MJ40 725 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CT47A1Q5JQC4 288 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CCDC186Q7Z3E2 898 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 DRC7Q8IY82 874 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 XPO4Q9C0E2 1151 aaKnown RBP15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 RPAP3Q9H6T3 665 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 SLC38A10Q9HBR0 1119 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 ZHX2Q9Y6X8 837 aa15.39■□□□□ 0.05
SPTBN1-205ENST00000496323 ZNF18P17022 549 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 PTGS1P23219 599 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 USP14P54578 494 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 TMEM119Q4V9L6 283 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 SNX29Q8TEQ0 813 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 TRIM9Q9C026 710 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 RMND1Q9NWS8 449 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 PPP1R9AQ9ULJ8 1098 aa15.38■□□□□ 0.05
SPTBN1-205ENST00000496323 GOLGA6L6A8MZA4 724 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 MARCH6O60337 910 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 FLOT1O75955 427 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 KMT5BQ4FZB7 885 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 ZNF658Q5TYW1 1059 aaPredicted RBP15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 KLHL10Q6JEL2 608 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 KCNK18Q7Z418 384 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 CLEC4DQ8WXI8 215 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 C7orf25Q9BPX7 421 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 DICER1Q9UPY3 1922 aaKnown RBP15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 ATAD5Q96QE3 1844 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 IGLV3-22A0A075B6J6 115 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 TBX3O15119 743 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 USP2O75604 605 aaPredicted RBP15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 STAT3P40763 770 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 PRKG1Q13976 671 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 KCNB1Q14721 858 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 HSP90AA4PQ58FG1 418 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 SLFN12Q8IYM2 578 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 AS3MTQ9HBK9 375 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 STK17AQ9UEE5 414 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 GDAQ9Y2T3 454 aa15.37■□□□□ 0.05
SPTBN1-205ENST00000496323 SBF1O95248 1867 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 NFIBO00712 420 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 MSH4O15457 936 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 CLCN1P35523 988 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 STX17P56962 302 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 RAVER2Q9HCJ3 691 aaKnown RBP15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 SAMSN1Q9NSI8 373 aaKnown RBP15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 ADM5C9JUS6 153 aa15.36■□□□□ 0.05
SPTBN1-205ENST00000496323 RHOBTB3O94955 611 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms