RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 RBAK-RBAKDNI3L0D1 243 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 CABYRO75952 493 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 PFKMP08237 780 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
TFE3-205ENST00000495940 SSTR3P32745 418 aaPredicted RBP15.77■□□□□ 0.12
TFE3-205ENST00000495940 SLFNL1Q499Z3 407 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 HERC6Q8IVU3 1022 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 ANKRD35Q8N283 1001 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 ARMT1Q9H993 441 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
TFE3-205ENST00000495940 CCDC171Q6TFL3 1326 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 TCRBV5S4A2TA0A5A2 114 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 TPM2P07951 284 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 UBE2HP62256 183 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 SLC9C2Q5TAH2 1124 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 TSHZ3Q63HK5 1081 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 TMCO2Q7Z6W1 182 aaPredicted RBP15.76■□□□□ 0.11
TFE3-205ENST00000495940 PPP1R13LQ8WUF5 828 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 MAP4K1Q92918 833 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 CCDC17Q96LX7 622 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 PHOX2BQ99453 314 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 HOMER2Q9NSB8 354 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 PDRG1Q9NUG6 133 aa15.76■□□□□ 0.11
TFE3-205ENST00000495940 DYNC1LI2O43237 492 aaPredicted RBP15.75■□□□□ 0.11
TFE3-205ENST00000495940 STX6O43752 255 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 SMPD1P17405 629 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 KCNA5P22460 613 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 PKP1Q13835 747 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 NECTIN1Q15223 517 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 CCDC183Q5T5S1 534 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
TFE3-205ENST00000495940 C16orf86Q6ZW13 317 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.75■□□□□ 0.11
TFE3-205ENST00000495940 AACSQ86V21 672 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.75■□□□□ 0.11
TFE3-205ENST00000495940 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.75■□□□□ 0.11
TFE3-205ENST00000495940 PDGFCQ9NRA1 345 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 MTUS1Q9ULD2 1270 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 SCN10AQ9Y5Y9 1956 aa15.75■□□□□ 0.11
TFE3-205ENST00000495940 TRIOO75962 3097 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 TNKSO95271 1327 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 C5orf42Q9H799 3197 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 NDUFB10O96000 172 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 ACTN1P12814 892 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 TMED8Q6PL24 325 aaPredicted RBP15.74■□□□□ 0.11
TFE3-205ENST00000495940 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
TFE3-205ENST00000495940 RUFY3Q7L099 469 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 FBXO16Q8IX29 292 aaPredicted RBP15.74■□□□□ 0.11
TFE3-205ENST00000495940 KIFC2Q96AC6 838 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 AP5M1Q9H0R1 490 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
TFE3-205ENST00000495940 TRIP12Q14669 1992 aaPredicted RBP15.74■□□□□ 0.11
TFE3-205ENST00000495940 CFAP54Q96N23 3096 aa15.74■□□□□ 0.11
TFE3-205ENST00000495940 ZNF536O15090 1300 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 SOWAHBA6NEL2 793 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 ATP2A1O14983 1001 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 ZNF500O60304 480 aaPredicted RBP15.73■□□□□ 0.11
TFE3-205ENST00000495940 MBD4O95243 580 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 ATP5JP18859 108 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 AK2P54819 239 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 C12orf60Q5U649 245 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 EEPD1Q7L9B9 569 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 FAM133AQ8N9E0 248 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 UPF3BQ9BZI7 483 aaKnown RBP15.73■□□□□ 0.11
TFE3-205ENST00000495940 TMEM63CQ9P1W3 806 aa15.73■□□□□ 0.11
TFE3-205ENST00000495940 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 USP17L21D6R901 530 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 ZBED4O75132 1171 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 F13A1P00488 732 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
TFE3-205ENST00000495940 LEXMQ3ZCV2 418 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 PTCRAQ6ISU1 281 aaPredicted RBP15.72■□□□□ 0.11
TFE3-205ENST00000495940 PRPF38AQ8NAV1 312 aaKnown RBP15.72■□□□□ 0.11
TFE3-205ENST00000495940 PHOSPHO2Q8TCD6 241 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 FTOQ9C0B1 505 aaKnown RBP eCLIP15.72■□□□□ 0.11
TFE3-205ENST00000495940 RBSNQ9H1K0 784 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 CTDP1Q9Y5B0 961 aaPredicted RBP15.72■□□□□ 0.11
TFE3-205ENST00000495940 ATG2AQ2TAZ0 1938 aa15.72■□□□□ 0.11
TFE3-205ENST00000495940 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.71■□□□□ 0.11
TFE3-205ENST00000495940 KIF28PB7ZC32 967 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 F5H6K3 240 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 GOLIM4O00461 696 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 DCXO43602 365 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 ZEB2O60315 1214 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 CHGBP05060 677 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 TPM3P06753 285 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 ALADP13716 330 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 KLRC3Q07444 240 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 CHST13Q8NET6 341 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
TFE3-205ENST00000495940 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.11
TFE3-205ENST00000495940 A1CFQ9NQ94 594 aaKnown RBP15.71■□□□□ 0.11
TFE3-205ENST00000495940 FBXO40Q9UH90 709 aa15.71■□□□□ 0.11
TFE3-205ENST00000495940 OFD1O75665 1012 aa15.7■□□□□ 0.1
TFE3-205ENST00000495940 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
TFE3-205ENST00000495940 SYT1P21579 422 aa15.7■□□□□ 0.1
TFE3-205ENST00000495940 DEFB103AP81534 67 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms