RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CUL5Q93034 780 aa22.36■■□□□ 1.17
HDAC4-212ENST00000495497 PXMP2Q9NR77 195 aa22.36■■□□□ 1.17
HDAC4-212ENST00000495497 VPS54Q9P1Q0 977 aa22.36■■□□□ 1.17
HDAC4-212ENST00000495497 RBM27Q9P2N5 1060 aaKnown RBP22.36■■□□□ 1.17
HDAC4-212ENST00000495497 BRCA2P51587 3418 aa22.36■■□□□ 1.17
HDAC4-212ENST00000495497 ADAMTS3O15072 1205 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 CDKL5O76039 1030 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 PDE4DQ08499 809 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 LHX8Q68G74 356 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 PPP1R18Q6NYC8 613 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 NSUN6Q8TEA1 469 aaKnown RBP22.35■■□□□ 1.17
HDAC4-212ENST00000495497 ZSCAN31Q96LW9 406 aaPredicted RBP22.35■■□□□ 1.17
HDAC4-212ENST00000495497 ABHD16BQ9H3Z7 469 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 RIC8AQ9NPQ8 531 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 PDGFCQ9NRA1 345 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 NRBP1Q9UHY1 535 aa22.35■■□□□ 1.17
HDAC4-212ENST00000495497 PIK3CDO00329 1044 aa22.34■■□□□ 1.17
HDAC4-212ENST00000495497 SEPT4O43236 478 aa22.34■■□□□ 1.17
HDAC4-212ENST00000495497 JAK2O60674 1132 aa22.34■■□□□ 1.17
HDAC4-212ENST00000495497 DEXIO95424 95 aa22.34■■□□□ 1.17
HDAC4-212ENST00000495497 SGPL1O95470 568 aa22.34■■□□□ 1.17
HDAC4-212ENST00000495497 EDNRBP24530 442 aa22.34■■□□□ 1.17
HDAC4-212ENST00000495497 NSUN7Q8NE18 718 aaKnown RBP22.34■■□□□ 1.17
HDAC4-212ENST00000495497 LENG1Q96BZ8 264 aaPredicted RBP22.34■■□□□ 1.17
HDAC4-212ENST00000495497 ZFP91Q96JP5 570 aaPredicted RBP22.34■■□□□ 1.17
HDAC4-212ENST00000495497 DDX20Q9UHI6 824 aaKnown RBP22.34■■□□□ 1.17
HDAC4-212ENST00000495497 RBBP6Q7Z6E9 1792 aaKnown RBP22.33■■□□□ 1.17
HDAC4-212ENST00000495497 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.33■■□□□ 1.17
HDAC4-212ENST00000495497 TFRCP02786 760 aaKnown RBP22.33■■□□□ 1.17
HDAC4-212ENST00000495497 MYCLP12524 364 aaPredicted RBP22.33■■□□□ 1.17
HDAC4-212ENST00000495497 GJA8P48165 433 aa22.33■■□□□ 1.17
HDAC4-212ENST00000495497 ADCY7P51828 1080 aa22.33■■□□□ 1.17
HDAC4-212ENST00000495497 TAPT1Q6NXT6 567 aa22.33■■□□□ 1.17
HDAC4-212ENST00000495497 IL31RAQ8NI17 732 aa22.33■■□□□ 1.17
HDAC4-212ENST00000495497 TMEM260Q9NX78 707 aa22.33■■□□□ 1.17
HDAC4-212ENST00000495497 ADCY6O43306 1168 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 NR3C2P08235 984 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 FDPSP14324 419 aaKnown RBP22.32■■□□□ 1.16
HDAC4-212ENST00000495497 PGM5Q15124 567 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 TMEM63BQ5T3F8 832 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 PGBD1Q96JS3 809 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 MPHOSPH6Q99547 160 aaKnown RBP22.32■■□□□ 1.16
HDAC4-212ENST00000495497 PDCD2LQ9BRP1 358 aa22.32■■□□□ 1.16
HDAC4-212ENST00000495497 SH2B1Q9NRF2 756 aaPredicted RBP22.32■■□□□ 1.16
HDAC4-212ENST00000495497 ORC3Q9UBD5 711 aaPredicted RBP22.32■■□□□ 1.16
HDAC4-212ENST00000495497 STK36Q9NRP7 1315 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 LOC102724159A0A0B4J2E5 919 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 B4DLN1 442 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 AKR1A1P14550 325 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 PTGS1P23219 599 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 ADCYAP1R1P41586 468 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 MRPL12P52815 198 aaKnown RBP22.31■■□□□ 1.16
HDAC4-212ENST00000495497 PWP2Q15269 919 aaKnown RBP22.31■■□□□ 1.16
HDAC4-212ENST00000495497 IWS1Q96ST2 819 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 VTA1Q9NP79 307 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 FAM184BQ9ULE4 1060 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 PCDHA6Q9UN73 950 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 PCDHA8Q9Y5H6 950 aa22.31■■□□□ 1.16
HDAC4-212ENST00000495497 MCM3APO60318 1980 aa22.3■■□□□ 1.16
HDAC4-212ENST00000495497 STXBP2Q15833 593 aa22.3■■□□□ 1.16
HDAC4-212ENST00000495497 CCDC12Q8WUD4 166 aaPredicted RBP22.3■■□□□ 1.16
HDAC4-212ENST00000495497 CRISPLD2Q9H0B8 497 aa22.3■■□□□ 1.16
HDAC4-212ENST00000495497 ZMYND12Q9H0C1 365 aa22.3■■□□□ 1.16
HDAC4-212ENST00000495497 C6orf50Q9HD87 102 aa22.3■■□□□ 1.16
HDAC4-212ENST00000495497 GJB4Q9NTQ9 266 aa22.3■■□□□ 1.16
HDAC4-212ENST00000495497 CLK2P49760 499 aaKnown RBP22.29■■□□□ 1.16
HDAC4-212ENST00000495497 NLRP5P59047 1200 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 JAKMIP3Q5VZ66 844 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 SEPT14Q6ZU15 432 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 CCDC148Q8NFR7 591 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 RASGRP4Q8TDF6 673 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 TMX3Q96JJ7 454 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 SH3GLB2Q9NR46 395 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 OGDHLQ9ULD0 1010 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 KCNJ14Q9UNX9 436 aa22.29■■□□□ 1.16
HDAC4-212ENST00000495497 ESYT2A0FGR8 921 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 SPDYE3A6NKU9 549 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 MSCO60682 206 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 RARBP10826 455 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 SMPD1P17405 629 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 FOSBP53539 338 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 IRX5P78411 483 aaPredicted RBP22.28■■□□□ 1.16
HDAC4-212ENST00000495497 TNFAIP2Q03169 654 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 GJC2Q5T442 439 aaPredicted RBP22.28■■□□□ 1.16
HDAC4-212ENST00000495497 VSIG10LQ86VR7 867 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 ALG1Q9BT22 464 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 FRMPD4Q14CM0 1322 aa22.28■■□□□ 1.16
HDAC4-212ENST00000495497 LRRC37A2A6NM11 1700 aa22.27■■□□□ 1.16
HDAC4-212ENST00000495497 MYCNP04198 464 aaPredicted RBP22.27■■□□□ 1.16
HDAC4-212ENST00000495497 CCND2P30279 289 aa22.27■■□□□ 1.16
HDAC4-212ENST00000495497 MRPS9P82933 396 aaKnown RBP22.27■■□□□ 1.16
HDAC4-212ENST00000495497 IL27Q8NEV9 243 aa22.27■■□□□ 1.16
HDAC4-212ENST00000495497 WDR11Q9BZH6 1224 aa22.27■■□□□ 1.16
HDAC4-212ENST00000495497 GLT8D2Q9H1C3 349 aa22.27■■□□□ 1.16
HDAC4-212ENST00000495497 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
HDAC4-212ENST00000495497 RBM47A0AV96 593 aaKnown RBP22.26■■□□□ 1.15
HDAC4-212ENST00000495497 EIF3JO75822 258 aaKnown RBP22.26■■□□□ 1.15
HDAC4-212ENST00000495497 RGS20O76081 388 aa22.26■■□□□ 1.15
HDAC4-212ENST00000495497 ARIH2O95376 493 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms