RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 DDR1Q08345 913 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 HGSNATQ68CP4 663 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 CCDC91Q7Z6B0 441 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 BICDL2A1A5D9 508 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 A6NNZ2 444 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 CHRNDQ07001 517 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 GLE1Q53GS7 698 aaKnown RBP17.04■□□□□ 0.32
SDF4-207ENST00000494748 C8orf74Q6P047 294 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 B4GALNT4Q76KP1 1039 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 CCDC43Q96MW1 224 aaKnown RBP17.04■□□□□ 0.32
SDF4-207ENST00000494748 NFU1Q9UMS0 254 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 LRRC53A6NM62 1247 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 USP17L21D6R901 530 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 CALML3P27482 149 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 PDE4DQ08499 809 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 TRADDQ15628 312 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 PTGISQ16647 500 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 CENPPQ6IPU0 288 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 FAM114A1Q8IWE2 563 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 A1CFQ9NQ94 594 aaKnown RBP17.03■□□□□ 0.32
SDF4-207ENST00000494748 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 BCL9O00512 1426 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 ESYT3A0FGR9 886 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 RBAK-RBAKDNI3L0D1 243 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
SDF4-207ENST00000494748 C1orf131Q8NDD1 294 aaKnown RBP17.03■□□□□ 0.32
SDF4-207ENST00000494748 ZNF473Q8WTR7 871 aaKnown RBP17.03■□□□□ 0.32
SDF4-207ENST00000494748 PRDM11Q9NQV5 511 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 PRPHP41219 470 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 C6orf89Q6UWU4 347 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 ANKRD13CQ8N6S4 541 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 DAGLBQ8NCG7 672 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 CASKIN2Q8WXE0 1202 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 IQCDQ96DY2 449 aa17.03■□□□□ 0.32
SDF4-207ENST00000494748 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
SDF4-207ENST00000494748 FAM207AQ9NSI2 230 aaPredicted RBP17.03■□□□□ 0.32
SDF4-207ENST00000494748 MYBP10242 640 aa17.02■□□□□ 0.32
SDF4-207ENST00000494748 UBA7P41226 1012 aa17.02■□□□□ 0.32
SDF4-207ENST00000494748 SLC1A4P43007 532 aa17.02■□□□□ 0.32
SDF4-207ENST00000494748 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.32
SDF4-207ENST00000494748 ITGB3BPQ13352 177 aaPredicted RBP17.02■□□□□ 0.32
SDF4-207ENST00000494748 TXNRD1Q16881 649 aa17.02■□□□□ 0.32
SDF4-207ENST00000494748 INF2Q27J81 1249 aa17.02■□□□□ 0.32
SDF4-207ENST00000494748 MMTAG2Q9BU76 263 aaKnown RBP17.02■□□□□ 0.32
SDF4-207ENST00000494748 CUEDC2Q9H467 287 aa17.02■□□□□ 0.32
SDF4-207ENST00000494748 SPATS2Q86XZ4 545 aaKnown RBP17.02■□□□□ 0.31
SDF4-207ENST00000494748 NDST4Q9H3R1 872 aa17.02■□□□□ 0.31
SDF4-207ENST00000494748 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.31
SDF4-207ENST00000494748 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.31
SDF4-207ENST00000494748 CYP2D6P10635 497 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 GYG1P46976 350 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 MNAT1P51948 309 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 CCDC178Q5BJE1 867 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 ALS2CR12Q96Q35 445 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 PPP1R37O75864 691 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 CCDC155Q8N6L0 562 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 MYCBPAPQ8TBZ2 947 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 ECHS1P30084 290 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 SEC24CP53992 1094 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 HDLBPQ00341 1268 aaKnown RBP17.01■□□□□ 0.31
SDF4-207ENST00000494748 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 EPB41L5Q9HCM4 733 aa17.01■□□□□ 0.31
SDF4-207ENST00000494748 CYTH3O43739 400 aa17■□□□□ 0.31
SDF4-207ENST00000494748 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
SDF4-207ENST00000494748 NR1D1P20393 614 aa17■□□□□ 0.31
SDF4-207ENST00000494748 CCDC181Q5TID7 509 aa17■□□□□ 0.31
SDF4-207ENST00000494748 PDXDC1Q6P996 788 aa17■□□□□ 0.31
SDF4-207ENST00000494748 CABP7Q86V35 215 aa17■□□□□ 0.31
SDF4-207ENST00000494748 IFT20Q8IY31 132 aa17■□□□□ 0.31
SDF4-207ENST00000494748 GPATCH11Q8N954 259 aa17■□□□□ 0.31
SDF4-207ENST00000494748 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
SDF4-207ENST00000494748 RUFY1Q96T51 708 aa17■□□□□ 0.31
SDF4-207ENST00000494748 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
SDF4-207ENST00000494748 BUB1O43683 1085 aa17■□□□□ 0.31
SDF4-207ENST00000494748 MAGEA1P43355 309 aa17■□□□□ 0.31
SDF4-207ENST00000494748 RASSF7Q02833 373 aa17■□□□□ 0.31
SDF4-207ENST00000494748 VCPKMTQ9H867 229 aa17■□□□□ 0.31
SDF4-207ENST00000494748 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
SDF4-207ENST00000494748 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
SDF4-207ENST00000494748 LAD1O00515 517 aa17■□□□□ 0.31
SDF4-207ENST00000494748 TLR2O60603 784 aa17■□□□□ 0.31
SDF4-207ENST00000494748 RASSF9O75901 435 aa17■□□□□ 0.31
SDF4-207ENST00000494748 MDH1P40925 334 aaKnown RBP17■□□□□ 0.31
SDF4-207ENST00000494748 KCNMA1Q12791 1236 aa17■□□□□ 0.31
SDF4-207ENST00000494748 RRAGAQ7L523 313 aa17■□□□□ 0.31
SDF4-207ENST00000494748 OTUD6BQ8N6M0 293 aa17■□□□□ 0.31
SDF4-207ENST00000494748 ATP6V1G3Q96LB4 118 aa17■□□□□ 0.31
SDF4-207ENST00000494748 CCT8L2Q96SF2 557 aa17■□□□□ 0.31
SDF4-207ENST00000494748 MAD2L2Q9UI95 211 aa17■□□□□ 0.31
SDF4-207ENST00000494748 GGA2Q9UJY4 613 aa17■□□□□ 0.31
SDF4-207ENST00000494748 BHMG1C9JSJ3 638 aaPredicted RBP16.99■□□□□ 0.31
SDF4-207ENST00000494748 STXBP3O00186 592 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms