RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 PDIA5Q14554 519 aa12.41□□□□□ -0.42
ZIC4-216ENST00000494569 COBLL1Q53SF7 1204 aa12.41□□□□□ -0.42
ZIC4-216ENST00000494569 JAKMIP3Q5VZ66 844 aa12.41□□□□□ -0.42
ZIC4-216ENST00000494569 HAS1Q92839 578 aa12.41□□□□□ -0.42
ZIC4-216ENST00000494569 CUL5Q93034 780 aa12.41□□□□□ -0.42
ZIC4-216ENST00000494569 TCP10L2B9ZVM9 353 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 LETM2Q2VYF4 491 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 MOXD1Q6UVY6 613 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 GLT8D2Q9H1C3 349 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 WNT10BO00744 389 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 CDC25AP30304 524 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 AFMP43652 599 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 ZRSR1Q15695 479 aaKnown RBP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 HYIQ5T013 277 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 VSTM4Q8IW00 320 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 ABHD8Q96I13 439 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 USP27XA6NNY8 438 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 TDP2O95551 362 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 SLC1A4P43007 532 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 NR1I3Q14994 352 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 UBE2SQ16763 222 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 CCDC96Q2M329 555 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 TMEM119Q4V9L6 283 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 ZNF658Q5TYW1 1059 aaPredicted RBP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
ZIC4-216ENST00000494569 PNMA5Q96PV4 448 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.42
ZIC4-216ENST00000494569 A0A1B0GTH6 734 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 FZD9O00144 591 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
ZIC4-216ENST00000494569 LBX1P52954 281 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 GRB10Q13322 594 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 SYDE2Q5VT97 1194 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 C7orf25Q9BPX7 421 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 DEFB129Q9H1M3 183 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 MYOZ2Q9NPC6 264 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 TRPM7Q96QT4 1865 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 RPN1P04843 607 aaKnown RBP12.39□□□□□ -0.43
ZIC4-216ENST00000494569 TPM4P67936 248 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 SPATA1Q5VX52 437 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
ZIC4-216ENST00000494569 CIAPIN1Q6FI81 312 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 SLC26A4O43511 780 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 BMP3P12645 472 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 GCFC2P16383 781 aaKnown RBP12.39□□□□□ -0.43
ZIC4-216ENST00000494569 USP11P51784 963 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 MRPL12P52815 198 aaKnown RBP12.39□□□□□ -0.43
ZIC4-216ENST00000494569 CABP7Q86V35 215 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 CCDC34Q96HJ3 373 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 PSTPIP2Q9H939 334 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 BLOC1S4Q9NUP1 217 aa12.39□□□□□ -0.43
ZIC4-216ENST00000494569 EPHX2P34913 555 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 CAP2P40123 477 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 ECE1P42892 770 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 GSDMDP57764 484 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 EHHADHQ08426 723 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 AP3B2Q13367 1082 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 NBPF9Q3BBW0 867 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 MCTP2Q6DN12 878 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 NUP88Q99567 741 aaPredicted RBP12.38□□□□□ -0.43
ZIC4-216ENST00000494569 BLZF1Q9H2G9 400 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 RANBP17Q9H2T7 1088 aaKnown RBP12.38□□□□□ -0.43
ZIC4-216ENST00000494569 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 RWDD2AQ9UIY3 292 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 NFE2L3Q9Y4A8 694 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 PLCG1P19174 1290 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 STAT6P42226 847 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
ZIC4-216ENST00000494569 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
ZIC4-216ENST00000494569 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
ZIC4-216ENST00000494569 TXLNAP40222 546 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 CALCRLQ16602 461 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 ADSSL1Q8N142 457 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 GPC2Q8N158 579 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 LENG9Q96B70 501 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 SAMSN1Q9NSI8 373 aaKnown RBP12.37□□□□□ -0.43
ZIC4-216ENST00000494569 PRR12Q9ULL5 1215 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 ARID2Q68CP9 1835 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 TMEM232C9JQI7 657 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 Q4G0T1 1027 aa12.37□□□□□ -0.43
ZIC4-216ENST00000494569 IRF2BP1Q8IU81 584 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms