RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZNF543Q08ER8 600 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 SEPT14Q6ZU15 432 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 ESR2Q92731 530 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 RNF41Q9H4P4 317 aaPredicted RBP11.29□□□□□ -0.6
UBR4-216ENST00000494503 KAT14Q9H8E8 782 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 PNMA2Q9UL42 364 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
UBR4-216ENST00000494503 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 RFXAPO00287 272 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBR4-216ENST00000494503 KCNJ6P48051 423 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 MFAP1P55081 439 aaKnown RBP11.28□□□□□ -0.6
UBR4-216ENST00000494503 BFSP2Q13515 415 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 ALX1Q15699 326 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
UBR4-216ENST00000494503 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 MORC4Q8TE76 937 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 CLEC4DQ8WXI8 215 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 ARNTL2Q8WYA1 636 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 NEDD4P46934 1319 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 CHD9Q3L8U1 2897 aa11.28□□□□□ -0.6
UBR4-216ENST00000494503 TET1Q8NFU7 2136 aa11.27□□□□□ -0.6
UBR4-216ENST00000494503 MYH7BA7E2Y1 1941 aa11.27□□□□□ -0.6
UBR4-216ENST00000494503 KIAA1217Q5T5P2 1943 aa11.27□□□□□ -0.6
UBR4-216ENST00000494503 LOC102724159A0A0B4J2E5 919 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 ZNF213O14771 459 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 KPNA6O60684 536 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 COL9A1P20849 921 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 TFF2Q03403 129 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 PWP2Q15269 919 aaKnown RBP11.27□□□□□ -0.61
UBR4-216ENST00000494503 PTGISQ16647 500 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
UBR4-216ENST00000494503 NFRKBQ6P4R8 1299 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
UBR4-216ENST00000494503 CCDC155Q8N6L0 562 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 DNERQ8NFT8 737 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 SLC9A7Q96T83 725 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 LAMA4Q16363 1823 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 WDR19Q8NEZ3 1342 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.61
UBR4-216ENST00000494503 MUC3AQ02505 3323 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 TLL1O43897 1013 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 SORBS3O60504 671 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 KDM4AO75164 1064 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 ARIH2O95376 493 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 FGRP09769 529 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 IQCF3P0C7M6 154 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 EIF2AK2P19525 551 aaKnown RBP11.26□□□□□ -0.61
UBR4-216ENST00000494503 RFC2P35250 354 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 NOVP48745 357 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 LY6KQ17RY6 165 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 AFG1LQ8WV93 481 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 TTC14Q96N46 770 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 NECAB3Q96P71 396 aaPredicted RBP11.26□□□□□ -0.61
UBR4-216ENST00000494503 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 CHD7Q9P2D1 2997 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 ABCB11O95342 1321 aa11.26□□□□□ -0.61
UBR4-216ENST00000494503 RBM47A0AV96 593 aaKnown RBP11.25□□□□□ -0.61
UBR4-216ENST00000494503 B4E1Z4 1266 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 CFBP00751 764 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 GH1P01241 217 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 MMP3P08254 477 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
UBR4-216ENST00000494503 SDSP20132 328 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 AAK1Q2M2I8 961 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 KRT40Q6A162 431 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 C7orf31Q8N865 590 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
UBR4-216ENST00000494503 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 MTUS1Q9ULD2 1270 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
UBR4-216ENST00000494503 A6NJR5 290 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 ZNF286BP0CG31 522 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 EDNRBP24530 442 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 KCNQ1P51787 676 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 STXBP2Q15833 593 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 HERC6Q8IVU3 1022 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms