RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ZNF467Q7Z7K2 595 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 NSUN6Q8TEA1 469 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 ZFP91Q96JP5 570 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 MAP3K20Q9NYL2 800 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 ESYT2A0FGR8 921 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 NPY5RQ15761 445 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 SAMD3Q8N6K7 520 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 DNERQ8NFT8 737 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 MAF1Q9H063 256 aa20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-208ENST00000493815 GJB2P29033 226 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 GNA11P29992 359 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 MTFR1Q15390 333 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 TRPV1Q8NER1 839 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 PHF20Q9BVI0 1012 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 PCDHA6Q9UN73 950 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 SMC3Q9UQE7 1217 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 PCDHA8Q9Y5H6 950 aa20.5■□□□□ 0.87
PDLIM7-208ENST00000493815 ASB14A6NK59 587 aa20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 XBP1P17861 261 aa20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 CCND3P30281 292 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 CLK2P49760 499 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 REXO1Q8N1G1 1221 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 PDCD2LQ9BRP1 358 aa20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 PCDHA4Q9UN74 947 aa20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 SYNGAP1Q96PV0 1343 aa20.49■□□□□ 0.87
PDLIM7-208ENST00000493815 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 MYCLP12524 364 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 PDE4DQ08499 809 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 PGM5Q15124 567 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 KRT40Q6A162 431 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 OXER1Q8TDS5 423 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 ZNF333Q96JL9 665 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 UNC93B1Q9H1C4 597 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 MCM3APO60318 1980 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 NR3C2P08235 984 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 EDNRBP24530 442 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 MAP3K21Q5TCX8 1036 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 ARMC5Q96C12 935 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 C8orf76Q96K31 380 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 GLT8D2Q9H1C3 349 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 CNPY2Q9Y2B0 182 aa20.48■□□□□ 0.87
PDLIM7-208ENST00000493815 CNGA1P29973 690 aa20.47■□□□□ 0.87
PDLIM7-208ENST00000493815 TRIM29Q14134 588 aa20.47■□□□□ 0.87
PDLIM7-208ENST00000493815 MORC4Q8TE76 937 aa20.47■□□□□ 0.87
PDLIM7-208ENST00000493815 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
PDLIM7-208ENST00000493815 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
PDLIM7-208ENST00000493815 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
PDLIM7-208ENST00000493815 ZNF865P0CJ78 1059 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 CYBAP13498 195 aa20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 ACVR2BQ13705 512 aa20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 TNS4Q8IZW8 715 aa20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 IWS1Q96ST2 819 aa20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 KATNBL1Q9H079 304 aa20.46■□□□□ 0.87
PDLIM7-208ENST00000493815 MMP1P03956 469 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 CCL5P13501 91 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 ANO1Q5XXA6 986 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 DAGLBQ8NCG7 672 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 RTEL1Q9NZ71 1219 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 FRMPD4Q14CM0 1322 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 M0R2N6 131 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 PTGS1P23219 599 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 MRPS9P82933 396 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 NR5A1Q13285 461 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 STXBP2Q15833 593 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 LENG1Q96BZ8 264 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 MPHOSPH6Q99547 160 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 RNF208Q9H0X6 261 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 ABHD16BQ9H3Z7 469 aa20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 HMX1Q9NP08 348 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-208ENST00000493815 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 FOSP01100 380 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 CCND2P30279 289 aa20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 GALNT17Q6IS24 598 aa20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 SEPT14Q6ZU15 432 aa20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 FAM177A1Q8N128 213 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 FBXO18Q8NFZ0 1043 aa20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 INTS4Q96HW7 963 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 ABHD8Q96I13 439 aa20.44■□□□□ 0.86
PDLIM7-208ENST00000493815 B4DLN1 442 aa20.43■□□□□ 0.86
PDLIM7-208ENST00000493815 ADCY6O43306 1168 aa20.43■□□□□ 0.86
PDLIM7-208ENST00000493815 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-208ENST00000493815 KRT2P35908 639 aa20.43■□□□□ 0.86
PDLIM7-208ENST00000493815 CCDC144BQ3MJ40 725 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms