RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CYBAP13498 195 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 AKR1B1P15121 316 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 FOXC1Q12948 553 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 AKNAD1Q5T1N1 836 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 OLFML2BQ68BL8 750 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 ABRAQ8N0Z2 381 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 TRPV1Q8NER1 839 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 NPLOC4Q8TAT6 608 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 STAG1Q8WVM7 1258 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 FOXJ1Q92949 421 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 MOV10L1Q9BXT6 1211 aaKnown RBP14.21□□□□□ -0.13
UPF3A-210ENST00000493727 MROH8Q9H579 483 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 CNNM2Q9H8M5 875 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 TAF6LQ9Y6J9 622 aa14.21□□□□□ -0.13
UPF3A-210ENST00000493727 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.14
UPF3A-210ENST00000493727 GREB1LQ9C091 1923 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-210ENST00000493727 MYH4Q9Y623 1939 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 SLC25A27O95847 323 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 PCP11498 1178 aaKnown RBP14.2□□□□□ -0.14
UPF3A-210ENST00000493727 ERCC3P19447 782 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 CASTP20810 708 aaKnown RBP14.2□□□□□ -0.14
UPF3A-210ENST00000493727 ADORA2AP29274 412 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 NT5C2P49902 561 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 RTP1P59025 263 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 TSGA10IPQ3SY00 556 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 FAM161BQ96MY7 647 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 NEK1Q96PY6 1258 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 LBHD1Q9BQE6 289 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-210ENST00000493727 KRT23Q9C075 422 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 PLXNA1Q9UIW2 1896 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
UPF3A-210ENST00000493727 NEDD4P46934 1319 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 GPR37L1O60883 481 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 PRDM1O75626 825 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 CNGA1P29973 690 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 CYP2C19P33261 490 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 COPB2P35606 906 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 PLS1Q14651 629 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 SNX17Q15036 470 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 RABEP1Q15276 862 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 ADCK5Q3MIX3 580 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 STOX1Q6ZVD7 989 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 SIAH1Q8IUQ4 282 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
UPF3A-210ENST00000493727 B4E1Z4 1266 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 SMIM22K7EJ46 135 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 TNFRSF10AO00220 468 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
UPF3A-210ENST00000493727 HMGB1P09429 215 aaKnown RBP14.18□□□□□ -0.14
UPF3A-210ENST00000493727 FCER1AP12319 257 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 C4orf48Q5BLP8 95 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 KIAA1755Q5JYT7 1200 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 PDXDC2PQ6P474 469 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 SH3RF1Q7Z6J0 888 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 NCAPG2Q86XI2 1143 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
UPF3A-210ENST00000493727 SPICE1Q8N0Z3 855 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 ARRDC4Q8NCT1 418 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 ESR2Q92731 530 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 ATG4CQ96DT6 458 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 MRGPRX2Q96LB1 330 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 UPF3BQ9BZI7 483 aaKnown RBP14.18□□□□□ -0.14
UPF3A-210ENST00000493727 TM6SF1Q9BZW5 370 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
UPF3A-210ENST00000493727 NCOR1O75376 2440 aa14.17□□□□□ -0.14
UPF3A-210ENST00000493727 EEF2P13639 858 aaKnown RBP14.17□□□□□ -0.14
UPF3A-210ENST00000493727 FGD1P98174 961 aa14.17□□□□□ -0.14
UPF3A-210ENST00000493727 C9orf50Q5SZB4 431 aa14.17□□□□□ -0.14
UPF3A-210ENST00000493727 CLEC10AQ8IUN9 316 aa14.17□□□□□ -0.14
UPF3A-210ENST00000493727 CDX2Q99626 313 aaPredicted RBP14.17□□□□□ -0.14
UPF3A-210ENST00000493727 ADAMTS5Q9UNA0 930 aa14.17□□□□□ -0.14
UPF3A-210ENST00000493727 MYO9BQ13459 2157 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 TSPY2A6NKD2 308 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 SEPT4O43236 478 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 SIAH2O43255 324 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 ORC4O43929 436 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 RPS6KB1P23443 525 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 MCM5P33992 734 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 NEK4P51957 841 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 SHHQ15465 462 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 GJC2Q5T442 439 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-210ENST00000493727 SLC39A5Q6ZMH5 540 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 RUFY3Q7L099 469 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 RIOX2Q8IUF8 465 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 MB21D2Q8IYB1 491 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-210ENST00000493727 EHBP1Q8NDI1 1231 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 KIF2CQ99661 725 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 TTYH1Q9H313 450 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-210ENST00000493727 PDLIM7Q9NR12 457 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 PDRG1Q9NUG6 133 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 PRKAG2Q9UGJ0 569 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 NRBP1Q9UHY1 535 aa14.16□□□□□ -0.14
UPF3A-210ENST00000493727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
UPF3A-210ENST00000493727 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 PRC1O43663 620 aa14.15□□□□□ -0.14
UPF3A-210ENST00000493727 RAD21O60216 631 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms