RNA–Protein interactions for RNA: ENST00000493378.1

ARF4-207, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-207ENST00000493378 TBC1D5Q92609 795 aa12.4□□□□□ -0.42
ARF4-207ENST00000493378 RMDN3Q96TC7 470 aa12.4□□□□□ -0.42
ARF4-207ENST00000493378 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.4□□□□□ -0.428e-6■■□□□ 13.3
ARF4-207ENST00000493378 VTA1Q9NP79 307 aa12.4□□□□□ -0.42
ARF4-207ENST00000493378 PXMP2Q9NR77 195 aa12.4□□□□□ -0.42
ARF4-207ENST00000493378 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.43
ARF4-207ENST00000493378 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 SEPT4O43236 478 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 STAM2O75886 525 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 FOSP01100 380 aaPredicted RBP12.39□□□□□ -0.43
ARF4-207ENST00000493378 GJB1P08034 283 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 ZNF865P0CJ78 1059 aaPredicted RBP12.39□□□□□ -0.43
ARF4-207ENST00000493378 XBP1P17861 261 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
ARF4-207ENST00000493378 ADCY7P51828 1080 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
ARF4-207ENST00000493378 MTFR1Q15390 333 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 XRRA1Q6P2D8 792 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 C6orf50Q9HD87 102 aa12.39□□□□□ -0.43
ARF4-207ENST00000493378 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 FDPSP14324 419 aaKnown RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 AKR1A1P14550 325 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 GJA8P48165 433 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 ACVR2BQ13705 512 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 ARHGEF16Q5VV41 709 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 CCDC83Q8IWF9 413 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 SNX21Q969T3 373 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 PURBQ96QR8 312 aaKnown RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 PDCD2LQ9BRP1 358 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 UNC93B1Q9H1C4 597 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
ARF4-207ENST00000493378 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
ARF4-207ENST00000493378 SPDYE3A6NKU9 549 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 EIF3JO75822 258 aaKnown RBP12.37□□□□□ -0.43
ARF4-207ENST00000493378 NR3C2P08235 984 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 CCND3P30281 292 aaPredicted RBP12.37□□□□□ -0.43
ARF4-207ENST00000493378 PDE4DQ08499 809 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 PGM5Q15124 567 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 STXBP2Q15833 593 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 USP17L6PQ6QN14 398 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 VSIG10LQ86VR7 867 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 VPS54Q9P1Q0 977 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 FAM184BQ9ULE4 1060 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
ARF4-207ENST00000493378 SGPL1O95470 568 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
ARF4-207ENST00000493378 CCND2P30279 289 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 NKX3-2P78367 333 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 CUL4AQ13619 759 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 PCNX4Q63HM2 1172 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 LHX8Q68G74 356 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 FCHSD1Q86WN1 690 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
ARF4-207ENST00000493378 ANKLE1Q8NAG6 615 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
ARF4-207ENST00000493378 ALG1Q9BT22 464 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 ZHX1Q9UKY1 873 aaPredicted RBP12.36□□□□□ -0.43
ARF4-207ENST00000493378 OGDHLQ9ULD0 1010 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 PCDHA6Q9UN73 950 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 Q9Y3F1 56 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 PCDHA8Q9Y5H6 950 aa12.36□□□□□ -0.43
ARF4-207ENST00000493378 M0R2N6 131 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 NKRFO15226 690 aaKnown RBP eCLIP12.35□□□□□ -0.43
ARF4-207ENST00000493378 JAK2O60674 1132 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
ARF4-207ENST00000493378 RARBP10826 455 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 SREBF1P36956 1147 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 NLRP5P59047 1200 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 NPY5RQ15761 445 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 UBE2SQ16763 222 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 IQSEC1Q6DN90 963 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 KCNV1Q6PIU1 500 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 FBXO16Q8IX29 292 aaPredicted RBP12.35□□□□□ -0.43
ARF4-207ENST00000493378 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
ARF4-207ENST00000493378 SCFD2Q8WU76 684 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 KIF3AQ9Y496 699 aa12.35□□□□□ -0.43
ARF4-207ENST00000493378 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
ARF4-207ENST00000493378 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 ICAM3P32942 547 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 GNPTABQ3T906 1256 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 DUSP28Q4G0W2 176 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
ARF4-207ENST00000493378 INTS4Q96HW7 963 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms