RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 NFIBO00712 420 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 FOXP2O15409 715 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 MYL3P08590 195 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 ACTN1P12814 892 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 CPT1AP50416 773 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
HDAC3-213ENST00000492506 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
HDAC3-213ENST00000492506 NFRKBQ6P4R8 1299 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 HLA-CQ95604 372 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 INCENPQ9NQS7 918 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 ADD3Q9UEY8 706 aaKnown RBP15.48■□□□□ 0.07
HDAC3-213ENST00000492506 STX8Q9UNK0 236 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 KIAA1217Q5T5P2 1943 aa15.48■□□□□ 0.07
HDAC3-213ENST00000492506 A6NJR5 290 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 GPR37L1O60883 481 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 GPNMBQ14956 572 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 TMEM31Q5JXX7 168 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 TTBK2Q6IQ55 1244 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 BTNL9Q6UXG8 535 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 OR6J1Q8NGC5 347 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 CTAGE1Q96RT6 745 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 NACAP1Q9BZK3 213 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 CD320Q9NPF0 282 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 HCN4Q9Y3Q4 1203 aa15.47■□□□□ 0.07
HDAC3-213ENST00000492506 LCHNA4D1U4 455 aa15.46■□□□□ 0.07
HDAC3-213ENST00000492506 SLC3A2P08195 630 aaKnown RBP15.46■□□□□ 0.07
HDAC3-213ENST00000492506 PTPN11Q06124 597 aaPredicted RBP15.46■□□□□ 0.07
HDAC3-213ENST00000492506 FAM47CQ5HY64 1035 aa15.46■□□□□ 0.07
HDAC3-213ENST00000492506 SLC30A10Q6XR72 485 aa15.46■□□□□ 0.07
HDAC3-213ENST00000492506 CLEC4DQ8WXI8 215 aa15.46■□□□□ 0.07
HDAC3-213ENST00000492506 NAPBQ9H115 298 aa15.46■□□□□ 0.07
HDAC3-213ENST00000492506 BAIAP3O94812 1187 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 EDNRBP24530 442 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 SLC16A2P36021 539 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 ZMYM1Q5SVZ6 1142 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 COPS5Q92905 334 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 FTOQ9C0B1 505 aaKnown RBP eCLIP15.45■□□□□ 0.06
HDAC3-213ENST00000492506 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
HDAC3-213ENST00000492506 DCTPP1Q9H773 170 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 GPHNQ9NQX3 736 aaPredicted RBP15.45■□□□□ 0.06
HDAC3-213ENST00000492506 MYH7BA7E2Y1 1941 aa15.45■□□□□ 0.06
HDAC3-213ENST00000492506 WDFY4Q6ZS81 3184 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 TSPY2A6NKD2 308 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 PI4K2BG5E9Z4 385 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 KPNA6O60684 536 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 WDR5P61964 334 aaKnown RBP15.44■□□□□ 0.06
HDAC3-213ENST00000492506 CTDSPL2Q05D32 466 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 TMCO2Q7Z6W1 182 aaPredicted RBP15.44■□□□□ 0.06
HDAC3-213ENST00000492506 LMCD1Q9NZU5 365 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 MTMR7Q9Y216 660 aa15.44■□□□□ 0.06
HDAC3-213ENST00000492506 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 FAM86C2PA6NEL3 165 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 NKRFO15226 690 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC3-213ENST00000492506 FGRP09769 529 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 BFSP2Q13515 415 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 PPP2R5BQ15173 497 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 TCTN1Q2MV58 587 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 GPATCH3Q96I76 525 aa15.43■□□□□ 0.06
HDAC3-213ENST00000492506 NAP1L5Q96NT1 182 aaPredicted RBP15.43■□□□□ 0.06
HDAC3-213ENST00000492506 TRIOO75962 3097 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
HDAC3-213ENST00000492506 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 ARIH2O95376 493 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 CALML3P27482 149 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 RPS6P62753 249 aaKnown RBP15.42■□□□□ 0.06
HDAC3-213ENST00000492506 DEFB103AP81534 67 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 PTGISQ16647 500 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 LRRFIP1Q32MZ4 808 aaKnown RBP15.42■□□□□ 0.06
HDAC3-213ENST00000492506 BRDTQ58F21 947 aaPredicted RBP15.42■□□□□ 0.06
HDAC3-213ENST00000492506 RNF207Q6ZRF8 634 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 AFAP1L1Q8TED9 768 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 GDPD5Q8WTR4 605 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 DHX38Q92620 1227 aaKnown RBP15.42■□□□□ 0.06
HDAC3-213ENST00000492506 PDCL3Q9H2J4 239 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 SUGCTQ9HAC7 445 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 ANAPC4Q9UJX5 808 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 MICAL3Q7RTP6 2002 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 MYH6P13533 1939 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 RAD50Q92878 1312 aa15.42■□□□□ 0.06
HDAC3-213ENST00000492506 ORC4O43929 436 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 RANBP6O60518 1105 aaKnown RBP15.41■□□□□ 0.06
HDAC3-213ENST00000492506 CXCL10P02778 98 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 KCNJ6P48051 423 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 PDE4DQ08499 809 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 GDF6Q6KF10 455 aaPredicted RBP15.41■□□□□ 0.06
HDAC3-213ENST00000492506 CCDC62Q6P9F0 684 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 SESTD1Q86VW0 696 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 DNERQ8NFT8 737 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
HDAC3-213ENST00000492506 KAT2BQ92831 832 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms