RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 IFNAR1P17181 557 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
TMC1-205ENST00000492418 LHX8Q68G74 356 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
TMC1-205ENST00000492418 PHKBQ93100 1093 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 FGD4Q96M96 766 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
TMC1-205ENST00000492418 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
TMC1-205ENST00000492418 SMCHD1A6NHR9 2005 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 NID2Q14112 1375 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 SMCO2A6NFE2 343 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 ST18O60284 1047 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
TMC1-205ENST00000492418 EIF3JO75822 258 aaKnown RBP12.84□□□□□ -0.35
TMC1-205ENST00000492418 NR3C2P08235 984 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 XBP1P17861 261 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 CCND2P30279 289 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
TMC1-205ENST00000492418 ADCY7P51828 1080 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 GHRHRQ02643 423 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 FUT2Q10981 343 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 RABEP1Q15276 862 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
TMC1-205ENST00000492418 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 SEPT14Q6ZU15 432 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
TMC1-205ENST00000492418 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 MORC4Q8TE76 937 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
TMC1-205ENST00000492418 BARHL2Q9NY43 387 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
TMC1-205ENST00000492418 DNM1LO00429 736 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 OPLAHO14841 1288 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 ZEB2O60315 1214 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 PFKFB2O60825 505 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 FOSP01100 380 aaPredicted RBP12.83□□□□□ -0.36
TMC1-205ENST00000492418 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
TMC1-205ENST00000492418 GNA11P29992 359 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 TTLL4Q14679 1199 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
TMC1-205ENST00000492418 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.36
TMC1-205ENST00000492418 MCTP2Q6DN12 878 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 BICD2Q8TD16 824 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 DPF3Q92784 378 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 WDR11Q9BZH6 1224 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 RIC8AQ9NPQ8 531 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 RBBP6Q7Z6E9 1792 aaKnown RBP12.83□□□□□ -0.36
TMC1-205ENST00000492418 ASTN1O14525 1302 aa12.83□□□□□ -0.36
TMC1-205ENST00000492418 STXBP3O00186 592 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
TMC1-205ENST00000492418 PPFIA3O75145 1194 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 STAM2O75886 525 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 DEXIO95424 95 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 PGK1P00558 417 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 TXNP10599 105 aaKnown RBP12.82□□□□□ -0.36
TMC1-205ENST00000492418 EDNRBP24530 442 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 NLRP5P59047 1200 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 NTRK3Q16288 839 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
TMC1-205ENST00000492418 WASF1Q92558 559 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 VTI1AQ96AJ9 217 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
TMC1-205ENST00000492418 PDCD2LQ9BRP1 358 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
TMC1-205ENST00000492418 PDGFCQ9NRA1 345 aa12.82□□□□□ -0.36
TMC1-205ENST00000492418 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
TMC1-205ENST00000492418 MEIS2O14770 477 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMC1-205ENST00000492418 SCRN1Q12765 414 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 PGM5Q15124 567 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 LRRC41Q15345 812 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 DUSP28Q4G0W2 176 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 TAPT1Q6NXT6 567 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 VSIG10LQ86VR7 867 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 NECAB1Q8N987 351 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 KATNBL1Q9H079 304 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 SH3GLB2Q9NR46 395 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 Q9Y3F1 56 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
TMC1-205ENST00000492418 SMPD1P17405 629 aa12.8□□□□□ -0.36
TMC1-205ENST00000492418 ZNF76P36508 570 aa12.8□□□□□ -0.36
TMC1-205ENST00000492418 CPT1AP50416 773 aa12.8□□□□□ -0.36
TMC1-205ENST00000492418 GJA9P57773 515 aa12.8□□□□□ -0.36
TMC1-205ENST00000492418 UBE2SQ16763 222 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms