RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	EXOC1	Q9NV70	894 aa		7.1	□□□□□ -1.27
FN1-223	ENST00000490833	NYAP2	Q9P242	653 aa		7.1	□□□□□ -1.27
FN1-223	ENST00000490833	SERPINA10	Q9UK55	444 aa		7.1	□□□□□ -1.27
FN1-223	ENST00000490833	PPP2R2C	Q9Y2T4	447 aa		7.1	□□□□□ -1.27
FN1-223	ENST00000490833	LUC7L2	Q9Y383	392 aa	Known RBP	7.1	□□□□□ -1.27
FN1-223	ENST00000490833	DAAM1	Q9Y4D1	1078 aa		7.1	□□□□□ -1.27
FN1-223	ENST00000490833	TACC3	Q9Y6A5	838 aa		7.1	□□□□□ -1.27
FN1-223	ENST00000490833		A0A1W2PQJ5	194 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	CTAGE9	A4FU28	777 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	KCNJ18	B7U540	433 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	KRT86	O43790	486 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	CCNT1	O60563	726 aa	Known RBP	7.09	□□□□□ -1.27
FN1-223	ENST00000490833	USO1	O60763	962 aa	Known RBP	7.09	□□□□□ -1.27
FN1-223	ENST00000490833	ATP1A3	P13637	1013 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	CCNE1	P24864	410 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	GABPA	Q06546	454 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	KCNJ12	Q14500	433 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	CALCRL	Q16602	461 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	ARHGAP29	Q52LW3	1261 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	CCDC93	Q567U6	631 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	TEX35	Q5T0J7	233 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	HAUS3	Q68CZ6	603 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	MAPKAPK5	Q8IW41	473 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	MSL3	Q8N5Y2	521 aa	Known RBP	7.09	□□□□□ -1.27
FN1-223	ENST00000490833	NELFB	Q8WX92	580 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	ZNF516	Q92618	1163 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	RUBCN	Q92622	972 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	ZDHHC15	Q96MV8	337 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	NUP88	Q99567	741 aa	Predicted RBP	7.09	□□□□□ -1.27
FN1-223	ENST00000490833	IDI2	Q9BXS1	227 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	HAUS4	Q9H6D7	363 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	SH2D4A	Q9H788	454 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	QTRT2	Q9H974	415 aa	Known RBP	7.09	□□□□□ -1.27
FN1-223	ENST00000490833	GINM1	Q9NU53	330 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	LRWD1	Q9UFC0	647 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	LY75	O60449	1722 aa		7.09	□□□□□ -1.27
FN1-223	ENST00000490833	COL1A1	P02452	1464 aa	Predicted RBP	7.09	□□□□□ -1.27
FN1-223	ENST00000490833	BTAF1	O14981	1849 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	AFF2	P51816	1311 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	MYH13	Q9UKX3	1938 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	CYP2D7	A0A087X1C5	515 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833		H0YIN7	160 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	POLRMT	O00411	1230 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	ZBTB5	O15062	677 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	DTNB	O60941	627 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	MFAP3L	O75121	409 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	ENTPD3	O75355	529 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	SRGN	P10124	158 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	PDHB	P11177	359 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	BMP6	P22004	513 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	OSBP	P22059	807 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	PBX1	P40424	430 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	APLP1	P51693	650 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	COPB1	P53618	953 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	RHBDL3	P58872	404 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	COPS2	P61201	443 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	GNG11	P61952	73 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	UBXN1	Q04323	297 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	GABPB1	Q06547	395 aa	Predicted RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	ZNF543	Q08ER8	600 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	ARID5B	Q14865	1188 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	WHAMMP3	Q1A5X7	153 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	LETM2	Q2VYF4	491 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	SPECC1	Q5M775	1068 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	ISM2	Q6H9L7	571 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	PADI6	Q6TGC4	694 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	TMCO3	Q6UWJ1	677 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	SYT10	Q6XYQ8	523 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	TMEM179	Q6ZVK1	233 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	UNC13D	Q70J99	1090 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	CMTR1	Q8N1G2	835 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	GUF1	Q8N442	669 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	TC2N	Q8N9U0	490 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	RABGGTA	Q92696	567 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	CALR3	Q96L12	384 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	FAM20A	Q96MK3	541 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	MXD3	Q9BW11	206 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	MAF1	Q9H063	256 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	PSTPIP2	Q9H939	334 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	USP40	Q9NVE5	1235 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	TRMT1	Q9NXH9	659 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	TMOD2	Q9NZR1	351 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	HERC5	Q9UII4	1024 aa	Known RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	FAM184B	Q9ULE4	1060 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	CAPN11	Q9UMQ6	739 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833		V9GYY5	206 aa	Predicted RBP	7.08	□□□□□ -1.28
FN1-223	ENST00000490833	LAMB1	P07942	1786 aa		7.08	□□□□□ -1.28
FN1-223	ENST00000490833	MYH6	P13533	1939 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	PITPNM2	Q9BZ72	1349 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	CYP3A7-CYP3A51P	A0A087WV96	503 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	IGKV6D-41	A0A0C4DH26	115 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	USP17L3	A6NCW0	530 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	USP17L4	A6NCW7	530 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	LGALS16	A8MUM7	142 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	URI1	O94763	535 aa	Predicted RBP	7.07	□□□□□ -1.28
FN1-223	ENST00000490833	CYP3A7	P24462	503 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	ANXA13	P27216	316 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	GGCX	P38435	758 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	GTF2I	P78347	998 aa		7.07	□□□□□ -1.28
FN1-223	ENST00000490833	ZBED6	P86452	979 aa		7.07	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms