RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 RBM47A0AV96 593 aaKnown RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 B4DLN1 442 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 KBTBD13C9JR72 458 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 GCOM1H8Y6P7 765 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 POLR2MP0CAP2 368 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 SMPD1P17405 629 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 HOXA13P31271 388 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 METAP2P50579 478 aaKnown RBP eCLIP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 PPP2R5BQ15173 497 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 IQSEC1Q6DN90 963 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 RNF180Q86T96 592 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 IL17RAQ96F46 866 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 IWS1Q96ST2 819 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 SENP6Q9GZR1 1112 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 NAP1L2Q9ULW6 460 aaPredicted RBP17.77■□□□□ 0.44
VPS26A-207ENST00000490696 PHF24Q9UPV7 400 aa17.77■□□□□ 0.44
VPS26A-207ENST00000490696 MYADML2A6NDP7 307 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 CTAGE5O15320 804 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
VPS26A-207ENST00000490696 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
VPS26A-207ENST00000490696 GJA9P57773 515 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 NKX3-2P78367 333 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 C8orf34Q49A92 452 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 TMEM63BQ5T3F8 832 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 ARHGEF16Q5VV41 709 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 CCSAPQ6IQ19 270 aaPredicted RBP17.76■□□□□ 0.43
VPS26A-207ENST00000490696 PXMP2Q9NR77 195 aa17.76■□□□□ 0.43
VPS26A-207ENST00000490696 DNAH12Q6ZR08 3092 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 EIF2AK2P19525 551 aaKnown RBP17.75■□□□□ 0.43
VPS26A-207ENST00000490696 PTGS1P23219 599 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
VPS26A-207ENST00000490696 LRRC26Q2I0M4 334 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 DUSP28Q4G0W2 176 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 NOL8Q76FK4 1167 aaKnown RBP17.75■□□□□ 0.43
VPS26A-207ENST00000490696 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 TSEN34Q9BSV6 310 aaKnown RBP17.75■□□□□ 0.43
VPS26A-207ENST00000490696 Q9Y3F1 56 aa17.75■□□□□ 0.43
VPS26A-207ENST00000490696 PIK3CDO00329 1044 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 MEIS2O14770 477 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 EVI5O60447 810 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 NR3C2P08235 984 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 C6orf222P0C671 652 aaPredicted RBP17.74■□□□□ 0.43
VPS26A-207ENST00000490696 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
VPS26A-207ENST00000490696 TLK2Q86UE8 772 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 GPKOWQ92917 476 aaPredicted RBP eCLIP17.74■□□□□ 0.432e-6■■□□□ 13
VPS26A-207ENST00000490696 WDR11Q9BZH6 1224 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 SPC25Q9HBM1 224 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
VPS26A-207ENST00000490696 V9GY48 417 aaPredicted RBP17.74■□□□□ 0.43
VPS26A-207ENST00000490696 H0YGN5 161 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 STXBP2Q15833 593 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 NTRK3Q16288 839 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 KCNA10Q16322 511 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 WWC2Q6AWC2 1192 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 FERMT2Q96AC1 680 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 NR2E3Q9Y5X4 410 aa17.73■□□□□ 0.43
VPS26A-207ENST00000490696 FRMPD4Q14CM0 1322 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 A0A1W2PQ45 241 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 A0A1W2PQY0 241 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 MOXD2PA6NHM9 499 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 DYNC1LI2O43237 492 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 EIF3JO75822 258 aaKnown RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 ARIH2O95376 493 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 ACLYP53396 1101 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 ATN1P54259 1190 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 SNX17Q15036 470 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 PGM5Q15124 567 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 GNASQ5JWF2 1037 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 CCDC62Q6P9F0 684 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 VSIG10LQ86VR7 867 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 PCSK9Q8NBP7 692 aaKnown RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-207ENST00000490696 PSTPIP2Q9H939 334 aa17.72■□□□□ 0.43
VPS26A-207ENST00000490696 NKRFO15226 690 aaKnown RBP eCLIP17.71■□□□□ 0.43
VPS26A-207ENST00000490696 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
VPS26A-207ENST00000490696 BEX3Q00994 111 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
VPS26A-207ENST00000490696 C1orf53Q5VUE5 145 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 SEPT14Q6ZU15 432 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 CUL5Q93034 780 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 AP5M1Q9H0R1 490 aa17.71■□□□□ 0.43
VPS26A-207ENST00000490696 NCOA5Q9HCD5 579 aaKnown RBP17.71■□□□□ 0.43
VPS26A-207ENST00000490696 hCG_1984214I3L0E3 225 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 STXBP3O00186 592 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
VPS26A-207ENST00000490696 RGS20O76081 388 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms