RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 NEDD4P46934 1319 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 RAD50Q92878 1312 aa18.63■□□□□ 0.57
PLOD3-216ENST00000489927 TXNP10599 105 aaKnown RBP18.62■□□□□ 0.57
PLOD3-216ENST00000489927 NFRKBQ6P4R8 1299 aa18.62■□□□□ 0.57
PLOD3-216ENST00000489927 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
PLOD3-216ENST00000489927 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
PLOD3-216ENST00000489927 RNF41Q9H4P4 317 aaPredicted RBP18.62■□□□□ 0.57
PLOD3-216ENST00000489927 KPNA6O60684 536 aa18.61■□□□□ 0.57
PLOD3-216ENST00000489927 ARIH2O95376 493 aa18.61■□□□□ 0.57
PLOD3-216ENST00000489927 GPATCH4Q5T3I0 446 aaKnown RBP18.61■□□□□ 0.57
PLOD3-216ENST00000489927 RGS22Q8NE09 1264 aa18.61■□□□□ 0.57
PLOD3-216ENST00000489927 ESR2Q92731 530 aa18.61■□□□□ 0.57
PLOD3-216ENST00000489927 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
PLOD3-216ENST00000489927 SCN10AQ9Y5Y9 1956 aa18.61■□□□□ 0.57
PLOD3-216ENST00000489927 B4DLN1 442 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 RFC2P35250 354 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 MRPL12P52815 198 aaKnown RBP18.6■□□□□ 0.57
PLOD3-216ENST00000489927 MRPS5P82675 430 aaKnown RBP18.6■□□□□ 0.57
PLOD3-216ENST00000489927 DGKHQ86XP1 1220 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 ADAMTS19Q8TE59 1207 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 TBC1D5Q92609 795 aa18.6■□□□□ 0.57
PLOD3-216ENST00000489927 TRANK1O15050 2925 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 ZNF213O14771 459 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 CA3P07451 260 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 ACTN1P12814 892 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 SDSP20132 328 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 MFAP1P55081 439 aaKnown RBP18.59■□□□□ 0.57
PLOD3-216ENST00000489927 CHMP4BP1P59074 171 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 PTPN11Q06124 597 aaPredicted RBP18.59■□□□□ 0.57
PLOD3-216ENST00000489927 CDC37Q16543 378 aaPredicted RBP18.59■□□□□ 0.57
PLOD3-216ENST00000489927 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 MICALL1Q8N3F8 863 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 PNMA1Q8ND90 353 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
PLOD3-216ENST00000489927 KDM4AO75164 1064 aa18.58■□□□□ 0.56
PLOD3-216ENST00000489927 B4GALNT3Q6L9W6 998 aa18.58■□□□□ 0.56
PLOD3-216ENST00000489927 CCDC62Q6P9F0 684 aa18.58■□□□□ 0.56
PLOD3-216ENST00000489927 RETREG2Q8NC44 543 aa18.58■□□□□ 0.56
PLOD3-216ENST00000489927 COL20A1Q9P218 1284 aa18.58■□□□□ 0.56
PLOD3-216ENST00000489927 NOD1Q9Y239 953 aa18.58■□□□□ 0.56
PLOD3-216ENST00000489927 ABCB11O95342 1321 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 MYO9BQ13459 2157 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 RFXAPO00287 272 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 BFSP2Q13515 415 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 LY6KQ17RY6 165 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 IQCA1Q86XH1 822 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 ADGRF4Q8IZF3 695 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 SYTL5Q8TDW5 730 aaPredicted RBP18.57■□□□□ 0.56
PLOD3-216ENST00000489927 AFG1LQ8WV93 481 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 TAAR1Q96RJ0 339 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 SLC9A7Q96T83 725 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 FTOQ9C0B1 505 aaKnown RBP eCLIP18.57■□□□□ 0.56
PLOD3-216ENST00000489927 CERS4Q9HA82 394 aa18.57■□□□□ 0.56
PLOD3-216ENST00000489927 MMP3P08254 477 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 ARHGAP1Q07960 439 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 PTGISQ16647 500 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 CWC27Q6UX04 472 aaKnown RBP18.56■□□□□ 0.56
PLOD3-216ENST00000489927 SMC5Q8IY18 1101 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 PHOSPHO2Q8TCD6 241 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 NSUN6Q8TEA1 469 aaKnown RBP18.56■□□□□ 0.56
PLOD3-216ENST00000489927 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 ZSCAN10Q96SZ4 725 aaPredicted RBP18.56■□□□□ 0.56
PLOD3-216ENST00000489927 UHRF1Q96T88 793 aaPredicted RBP18.56■□□□□ 0.56
PLOD3-216ENST00000489927 MAF1Q9H063 256 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 TSPYL2Q9H2G4 693 aaPredicted RBP18.56■□□□□ 0.56
PLOD3-216ENST00000489927 KAT14Q9H8E8 782 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 TANC1Q9C0D5 1861 aa18.56■□□□□ 0.56
PLOD3-216ENST00000489927 EPOPA6NHQ4 379 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 B4E1Z4 1266 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 ARHGEF15O94989 841 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 GH1P01241 217 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 NT5C2P49902 561 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 CHST3Q7LGC8 479 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 HERC6Q8IVU3 1022 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 PLEKHM2Q8IWE5 1019 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 ENAHQ8N8S7 591 aaPredicted RBP18.55■□□□□ 0.56
PLOD3-216ENST00000489927 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 KAT2BQ92831 832 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 RMDN3Q96TC7 470 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
PLOD3-216ENST00000489927 LAMA4Q16363 1823 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 TFF2Q03403 129 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 TAP1Q03518 808 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 STXBP2Q15833 593 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
PLOD3-216ENST00000489927 SESTD1Q86VW0 696 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 MCF2L2Q86YR7 1114 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 IWS1Q96ST2 819 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 OSBPL3Q9H4L5 887 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 JMJD4Q9H9V9 463 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
PLOD3-216ENST00000489927 ZSWIM5Q9P217 1185 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms