RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 KPNA6O60684 536 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 ARHGEF15O94989 841 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 TXNP10599 105 aaKnown RBP17.64■□□□□ 0.41
FAM3D-204ENST00000489857 ACTN1P12814 892 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 BMP1P13497 986 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 RFC2P35250 354 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 TFF2Q03403 129 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-204ENST00000489857 TBC1D10CQ8IV04 446 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 IL27Q8NEV9 243 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 TTC14Q96N46 770 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 NECAB3Q96P71 396 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-204ENST00000489857 SLC9A7Q96T83 725 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 TSPYL2Q9H2G4 693 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-204ENST00000489857 MTCH2Q9Y6C9 303 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 RAD50Q92878 1312 aa17.64■□□□□ 0.41
FAM3D-204ENST00000489857 GOLGA8HP0CJ92 632 aa17.63■□□□□ 0.41
FAM3D-204ENST00000489857 POU3F3P20264 500 aaPredicted RBP17.63■□□□□ 0.41
FAM3D-204ENST00000489857 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
FAM3D-204ENST00000489857 RETREG2Q8NC44 543 aa17.63■□□□□ 0.41
FAM3D-204ENST00000489857 MPHOSPH6Q99547 160 aaKnown RBP17.63■□□□□ 0.41
FAM3D-204ENST00000489857 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
FAM3D-204ENST00000489857 TAP1Q03518 808 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 USH1GQ495M9 461 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 KRT40Q6A162 431 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 HERC6Q8IVU3 1022 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 RGS22Q8NE09 1264 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 PHOSPHO2Q8TCD6 241 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 TBC1D5Q92609 795 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 CTAGE1Q96RT6 745 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
FAM3D-204ENST00000489857 UBA5Q9GZZ9 404 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
FAM3D-204ENST00000489857 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
FAM3D-204ENST00000489857 PRRC2BQ5JSZ5 2229 aaKnown RBP17.62■□□□□ 0.41
FAM3D-204ENST00000489857 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 KCNQ1P51787 676 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 SKIV2LQ15477 1246 aaKnown RBP17.61■□□□□ 0.41
FAM3D-204ENST00000489857 MFSD6Q6ZSS7 791 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 AFG1LQ8WV93 481 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 ZKSCAN3Q9BRR0 538 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 COL20A1Q9P218 1284 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 NEDD4P46934 1319 aa17.61■□□□□ 0.41
FAM3D-204ENST00000489857 B4DLN1 442 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 GTPBP6O43824 516 aaPredicted RBP17.6■□□□□ 0.41
FAM3D-204ENST00000489857 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
FAM3D-204ENST00000489857 MRPL12P52815 198 aaKnown RBP17.6■□□□□ 0.41
FAM3D-204ENST00000489857 CHMP4BP1P59074 171 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 BFSP2Q13515 415 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 GPNMBQ14956 572 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 GPATCH4Q5T3I0 446 aaKnown RBP17.6■□□□□ 0.41
FAM3D-204ENST00000489857 SPRED2Q7Z698 418 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
FAM3D-204ENST00000489857 ARNTL2Q8WYA1 636 aa17.6■□□□□ 0.41
FAM3D-204ENST00000489857 TRANK1O15050 2925 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 MMP3P08254 477 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 RRP1P56182 461 aaKnown RBP17.59■□□□□ 0.41
FAM3D-204ENST00000489857 ARHGAP1Q07960 439 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 CDC37Q16543 378 aaPredicted RBP17.59■□□□□ 0.41
FAM3D-204ENST00000489857 PTGISQ16647 500 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 GDF6Q6KF10 455 aaPredicted RBP17.59■□□□□ 0.41
FAM3D-204ENST00000489857 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 ESR2Q92731 530 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 KAT2BQ92831 832 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 CRBNQ96SW2 442 aa17.59■□□□□ 0.41
FAM3D-204ENST00000489857 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
FAM3D-204ENST00000489857 REV3LO60673 3130 aa17.58■□□□□ 0.41
FAM3D-204ENST00000489857 RBAK-RBAKDNI3L0D1 243 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 BAIAP3O94812 1187 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 GH1P01241 217 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 HDAC1Q13547 482 aaPredicted RBP17.58■□□□□ 0.4
FAM3D-204ENST00000489857 AAK1Q2M2I8 961 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 SEPT14Q6ZU15 432 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 SESTD1Q86VW0 696 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 TET1Q8NFU7 2136 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 CAGE1Q8TC20 777 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 AFAP1L1Q8TED9 768 aa17.58■□□□□ 0.4
FAM3D-204ENST00000489857 DHX38Q92620 1227 aaKnown RBP17.58■□□□□ 0.4
FAM3D-204ENST00000489857 TCF20Q9UGU0 1960 aaKnown RBP17.57■□□□□ 0.4
FAM3D-204ENST00000489857 ABCB11O95342 1321 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 LCHNA4D1U4 455 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 KIF28PB7ZC32 967 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 GRB10Q13322 594 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 CHST3Q7LGC8 479 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 TMCO2Q7Z6W1 182 aaPredicted RBP17.57■□□□□ 0.4
FAM3D-204ENST00000489857 ADGRF4Q8IZF3 695 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 CCDC155Q8N6L0 562 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 PNMA1Q8ND90 353 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
FAM3D-204ENST00000489857 MAF1Q9H063 256 aa17.57■□□□□ 0.4
FAM3D-204ENST00000489857 TLL1O43897 1013 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 LPXNO60711 386 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 KDM4AO75164 1064 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms