RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ACLY	P53396	1101 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	GHRHR	Q02643	423 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	GNAS	Q5JWF2	1037 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	TLK2	Q86UE8	772 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	COL20A1	Q9P218	1284 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	BRPF3	Q9ULD4	1205 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772		Q9Y3F1	56 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	CEP290	O15078	2479 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	PLXNA1	Q9UIW2	1896 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772		A0A1W2PQ45	241 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772		A0A1W2PQY0	241 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	RBM47	A0AV96	593 aa	Known RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	MYADML2	A6NDP7	307 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	DYNC1LI2	O43237	492 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	ZEB2	O60315	1214 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	EIF2AK2	P19525	551 aa	Known RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	CAST	P20810	708 aa	Known RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	RPS6KB1	P23443	525 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	HOXA13	P31271	388 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	RCAN1	P53805	252 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	NKX3-2	P78367	333 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	STXBP2	Q15833	593 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	RTN1	Q16799	776 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	DUSP28	Q4G0W2	176 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	C1orf53	Q5VUE5	145 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772		Q6ZUG5	572 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	FBXL16	Q8N461	479 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	CCDC82	Q8N4S0	544 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	SCFD2	Q8WU76	684 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	GLT1D1	Q96MS3	346 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	PXMP2	Q9NR77	195 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	ATP11B	Q9Y2G3	1177 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	CCDC196	A0A1B0GTZ2	297 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	GOLGA8A	A7E2F4	631 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	GOLGA8B	A8MQT2	603 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	EIF3J	O75822	258 aa	Known RBP	12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	RTP1	P59025	263 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	TTLL4	Q14679	1199 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	SNX17	Q15036	470 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	PPP2R5B	Q15173	497 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	FSCN1	Q16658	493 aa	Known RBP	12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	BRF1	Q92994	677 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	STARD7	Q9NQZ5	370 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	PRKAG2	Q9UGJ0	569 aa		12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.8	□□□□□ -0.36
GGA1-222	ENST00000489772	NKRF	O15226	690 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	CTAGE5	O15320	804 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	ASGR1	P07306	291 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	NR3C2	P08235	984 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	TXN	P10599	105 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	SYN1	P17600	705 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	METAP2	P50579	478 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	IRX5	P78411	483 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	BEX3	Q00994	111 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	APOBR	Q0VD83	1088 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	TRIM60	Q495X7	471 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	RUFY3	Q7L099	469 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	FCHSD1	Q86WN1	690 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	CUL5	Q93034	780 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	VTI1A	Q96AJ9	217 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	ZSWIM6	Q9HCJ5	1215 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	COLQ	Q9Y215	455 aa	Predicted RBP	12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	CYP46A1	Q9Y6A2	500 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	ELP1	O95163	1332 aa		12.79	□□□□□ -0.36
GGA1-222	ENST00000489772	hCG_1642624	A0A1W2PR95	340 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	CABYR	O75952	493 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	CPT1A	P50416	773 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	BRDT	Q58F21	947 aa	Predicted RBP	12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	TMEM63B	Q5T3F8	832 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	SEPT14	Q6ZU15	432 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	HEATR3	Q7Z4Q2	680 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	OR6J1	Q8NGC5	347 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	SMARCC2	Q8TAQ2	1214 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	PDCD2L	Q9BRP1	358 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	TM6SF1	Q9BZW5	370 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	PSTPIP2	Q9H939	334 aa		12.78	□□□□□ -0.36
GGA1-222	ENST00000489772	PIK3CD	O00329	1044 aa		12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	PQBP1	O60828	265 aa	Known RBP	12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	MYCL	P12524	364 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	PTGS1	P23219	599 aa		12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	PGM5	Q15124	567 aa		12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	CXCL17	Q6UXB2	119 aa		12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	VSIG10L	Q86VR7	867 aa		12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	AGXT2	Q9BYV1	514 aa		12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-222	ENST00000489772		V9GY48	417 aa	Predicted RBP	12.77	□□□□□ -0.37
GGA1-222	ENST00000489772	RANBP2	P49792	3224 aa	Known RBP	12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	MROH7	Q68CQ1	1323 aa		12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	CNTNAP5	Q8WYK1	1306 aa		12.76	□□□□□ -0.37
GGA1-222	ENST00000489772		A0A0U1RQG5	324 aa	Predicted RBP	12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	CDC27	P30260	824 aa		12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	CCND2	P30279	289 aa		12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	ADD1	P35611	737 aa	Known RBP	12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	TLE2	Q04725	743 aa		12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	FUT2	Q10981	343 aa		12.76	□□□□□ -0.37
GGA1-222	ENST00000489772	KCNV1	Q6PIU1	500 aa		12.76	□□□□□ -0.37

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