RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 EVI5LQ96CN4 794 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 PNMA2Q9UL42 364 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 MTCH2Q9Y6C9 303 aa15.25■□□□□ 0.03
LTA-216ENST00000489638 PRRC2BQ5JSZ5 2229 aaKnown RBP15.25■□□□□ 0.03
LTA-216ENST00000489638 KPNA6O60684 536 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 SNHG28P0DPA3 235 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 KCNQ1P51787 676 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
LTA-216ENST00000489638 HERC6Q8IVU3 1022 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 DNERQ8NFT8 737 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 PHOSPHO2Q8TCD6 241 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 MPHOSPH6Q99547 160 aaKnown RBP15.24■□□□□ 0.03
LTA-216ENST00000489638 CERS4Q9HA82 394 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 TRANK1O15050 2925 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 REV3LO60673 3130 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 ARIH2O95376 493 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 TXNP10599 105 aaKnown RBP15.24■□□□□ 0.03
LTA-216ENST00000489638 TAP1Q03518 808 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 KRT40Q6A162 431 aa15.24■□□□□ 0.03
LTA-216ENST00000489638 ZNF589Q86UQ0 364 aaPredicted RBP15.24■□□□□ 0.03
LTA-216ENST00000489638 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
LTA-216ENST00000489638 HSPD1P10809 573 aaKnown RBP15.23■□□□□ 0.03
LTA-216ENST00000489638 HAND2P61296 217 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 BFSP2Q13515 415 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 SKIV2LQ15477 1246 aaKnown RBP15.23■□□□□ 0.03
LTA-216ENST00000489638 AAK1Q2M2I8 961 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 TBC1D10CQ8IV04 446 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 CTAGE1Q96RT6 745 aa15.23■□□□□ 0.03
LTA-216ENST00000489638 ZBTB47Q9UFB7 747 aaPredicted RBP15.23■□□□□ 0.03
LTA-216ENST00000489638 TCF20Q9UGU0 1960 aaKnown RBP15.22■□□□□ 0.03
LTA-216ENST00000489638 BAIAP3O94812 1187 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 PDE1AP54750 535 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 CCDC62Q6P9F0 684 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 SPRED2Q7Z698 418 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 TET1Q8NFU7 2136 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 ARNTL2Q8WYA1 636 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 TTC14Q96N46 770 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
LTA-216ENST00000489638 CPVLQ9H3G5 476 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 NOD1Q9Y239 953 aa15.22■□□□□ 0.03
LTA-216ENST00000489638 XIRP2A4UGR9 3374 aa15.21■□□□□ 0.03
LTA-216ENST00000489638 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
LTA-216ENST00000489638 MMP3P08254 477 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.02
LTA-216ENST00000489638 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.02
LTA-216ENST00000489638 GPNMBQ14956 572 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 PTGISQ16647 500 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 USH1GQ495M9 461 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 GPATCH4Q5T3I0 446 aaKnown RBP15.21■□□□□ 0.02
LTA-216ENST00000489638 ANKRD45Q5TZF3 282 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 SESTD1Q86VW0 696 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 RGS22Q8NE09 1264 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 AFG1LQ8WV93 481 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 PTPRSQ13332 1948 aa15.21■□□□□ 0.02
LTA-216ENST00000489638 NEDD4P46934 1319 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 B4DLN1 442 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 KIF28PB7ZC32 967 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 LPXNO60711 386 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
LTA-216ENST00000489638 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 ARHGAP1Q07960 439 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 GRB10Q13322 594 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 MFSD6Q6ZSS7 791 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 TICAM2Q86XR7 235 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 CAGE1Q8TC20 777 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 AFAP1L1Q8TED9 768 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 DHX38Q92620 1227 aaKnown RBP15.2■□□□□ 0.02
LTA-216ENST00000489638 KAT2BQ92831 832 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 COL20A1Q9P218 1284 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 COG5Q9UP83 839 aa15.2■□□□□ 0.02
LTA-216ENST00000489638 LCHNA4D1U4 455 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 PLA2G5P39877 138 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 WDR5P61964 334 aaKnown RBP15.19■□□□□ 0.02
LTA-216ENST00000489638 RBL2Q08999 1139 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 CDC37Q16543 378 aaPredicted RBP15.19■□□□□ 0.02
LTA-216ENST00000489638 GDF6Q6KF10 455 aaPredicted RBP15.19■□□□□ 0.02
LTA-216ENST00000489638 SEPT14Q6ZU15 432 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 CCDC155Q8N6L0 562 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 SYTL5Q8TDW5 730 aaPredicted RBP15.19■□□□□ 0.02
LTA-216ENST00000489638 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 C1QTNF1Q9BXJ1 281 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 UBA5Q9GZZ9 404 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 MAF1Q9H063 256 aa15.19■□□□□ 0.02
LTA-216ENST00000489638 TLL1O43897 1013 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 GH1P01241 217 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 SELPP16109 830 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 KCNJ6P48051 423 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 LY6KQ17RY6 165 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 LRRC8DQ7L1W4 858 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 TMCO2Q7Z6W1 182 aaPredicted RBP15.18■□□□□ 0.02
LTA-216ENST00000489638 DGKHQ86XP1 1220 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 ESR2Q92731 530 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 TAAR1Q96RJ0 339 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
LTA-216ENST00000489638 RNF41Q9H4P4 317 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms