RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 SCFD2Q8WU76 684 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
LINC00173-204ENST00000489452 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 ZSWIM5Q9P217 1185 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 SLC4A7Q9Y6M7 1214 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 WDR19Q8NEZ3 1342 aa15.66■□□□□ 0.1
LINC00173-204ENST00000489452 LCTP09848 1927 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 B4DLN1 442 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 SUPT20HL2P0C7V6 817 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 MYOGP15173 224 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 MRPL12P52815 198 aaKnown RBP15.65■□□□□ 0.1
LINC00173-204ENST00000489452 AAMPQ13685 434 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 RAB30Q15771 203 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 CDC37Q16543 378 aaPredicted RBP15.65■□□□□ 0.1
LINC00173-204ENST00000489452 CCDC178Q5BJE1 867 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 SEPT14Q6ZU15 432 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 CHST3Q7LGC8 479 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 DNERQ8NFT8 737 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 TAAR1Q96RJ0 339 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 ZSCAN10Q96SZ4 725 aaPredicted RBP15.65■□□□□ 0.1
LINC00173-204ENST00000489452 OSBPL3Q9H4L5 887 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 SLC28A3Q9HAS3 691 aa15.65■□□□□ 0.1
LINC00173-204ENST00000489452 YBX2Q9Y2T7 364 aaKnown RBP15.65■□□□□ 0.1
LINC00173-204ENST00000489452 ARIH2O95376 493 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 EDNRBP24530 442 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 ADGRE1Q14246 886 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 TTLL4Q14679 1199 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 IMMTQ16891 758 aaKnown RBP15.64■□□□□ 0.09
LINC00173-204ENST00000489452 ENAHQ8N8S7 591 aaPredicted RBP15.64■□□□□ 0.09
LINC00173-204ENST00000489452 RGS22Q8NE09 1264 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 VWCEQ96DN2 955 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 RAD50Q92878 1312 aa15.64■□□□□ 0.09
LINC00173-204ENST00000489452 A6NJR5 290 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 HIP1O00291 1037 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC00173-204ENST00000489452 PARP1P09874 1014 aaKnown RBP15.63■□□□□ 0.09
LINC00173-204ENST00000489452 LY6KQ17RY6 165 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 QRICH1Q2TAL8 776 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 SYTL5Q8TDW5 730 aaPredicted RBP15.63■□□□□ 0.09
LINC00173-204ENST00000489452 AFG1LQ8WV93 481 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 ANKS1AQ92625 1134 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 COL20A1Q9P218 1284 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 CTNNA3Q9UI47 895 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 ABCB11O95342 1321 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 LRRC37A2A6NM11 1700 aa15.63■□□□□ 0.09
LINC00173-204ENST00000489452 KPNA6O60684 536 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 RETREG2Q8NC44 543 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 NSUN6Q8TEA1 469 aaKnown RBP15.62■□□□□ 0.09
LINC00173-204ENST00000489452 RMDN3Q96TC7 470 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 UBAC1Q9BSL1 405 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 DSCC1Q9BVC3 393 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00173-204ENST00000489452 JMJD4Q9H9V9 463 aa15.62■□□□□ 0.09
LINC00173-204ENST00000489452 ATP2A2P16615 1042 aaKnown RBP15.61■□□□□ 0.09
LINC00173-204ENST00000489452 EIF2AK2P19525 551 aaKnown RBP15.61■□□□□ 0.09
LINC00173-204ENST00000489452 STXBP2Q15833 593 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 ARHGEF16Q5VV41 709 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 NFRKBQ6P4R8 1299 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 CCDC62Q6P9F0 684 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 MCF2L2Q86YR7 1114 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 STAG2Q8N3U4 1231 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 KRT23Q9C075 422 aa15.61■□□□□ 0.09
LINC00173-204ENST00000489452 MRPL11Q9Y3B7 192 aaKnown RBP15.61■□□□□ 0.09
LINC00173-204ENST00000489452 REV3LO60673 3130 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 CFBP00751 764 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 IFIT1BQ5T764 474 aaKnown RBP15.6■□□□□ 0.09
LINC00173-204ENST00000489452 PPP2R2DQ66LE6 453 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 MICALL1Q8N3F8 863 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
LINC00173-204ENST00000489452 IL25Q9H293 177 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 CERS4Q9HA82 394 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 TRANK1O15050 2925 aa15.6■□□□□ 0.09
LINC00173-204ENST00000489452 RFXAPO00287 272 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 SORBS3O60504 671 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 GH1P01241 217 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 IQCF3P0C7M6 154 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 ACTN1P12814 892 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 ARHGAP1Q07960 439 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 PTGISQ16647 500 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 TJAP1Q5JTD0 557 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 CYB5R4Q7L1T6 521 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 IWS1Q96ST2 819 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 CNNM2Q9H8M5 875 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 PCDHA11Q9Y5I1 949 aa15.59■□□□□ 0.09
LINC00173-204ENST00000489452 KLRF2D3W0D1 207 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 RBAK-RBAKDNI3L0D1 243 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 EIF3JO75822 258 aaKnown RBP15.58■□□□□ 0.08
LINC00173-204ENST00000489452 NR3C2P08235 984 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 MMP3P08254 477 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 MYCLP12524 364 aaPredicted RBP15.58■□□□□ 0.08
LINC00173-204ENST00000489452 NT5C2P49902 561 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 PTPN11Q06124 597 aaPredicted RBP15.58■□□□□ 0.08
LINC00173-204ENST00000489452 BFSP2Q13515 415 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 TMEM67Q5HYA8 995 aa15.58■□□□□ 0.08
LINC00173-204ENST00000489452 GDF6Q6KF10 455 aaPredicted RBP15.58■□□□□ 0.08
LINC00173-204ENST00000489452 ALG1Q9BT22 464 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms