RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CBX2Q14781 532 aaPredicted RBP18.12■□□□□ 0.49
UFD1-209ENST00000489406 WDR11Q9BZH6 1224 aa18.12■□□□□ 0.49
UFD1-209ENST00000489406 GPR108Q9NPR9 543 aa18.12■□□□□ 0.49
UFD1-209ENST00000489406 CYP2D7A0A087X1C5 515 aa18.11■□□□□ 0.49
UFD1-209ENST00000489406 PARNO95453 639 aaKnown RBP18.11■□□□□ 0.49
UFD1-209ENST00000489406 NDUFB10O96000 172 aa18.11■□□□□ 0.49
UFD1-209ENST00000489406 AMHP03971 560 aa18.11■□□□□ 0.49
UFD1-209ENST00000489406 DHX38Q92620 1227 aaKnown RBP18.11■□□□□ 0.49
UFD1-209ENST00000489406 CTAGE1Q96RT6 745 aa18.11■□□□□ 0.49
UFD1-209ENST00000489406 CHD6Q8TD26 2715 aa18.1■□□□□ 0.49
UFD1-209ENST00000489406 OAZ1P54368 228 aa18.1■□□□□ 0.49
UFD1-209ENST00000489406 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
UFD1-209ENST00000489406 MCTP2Q6DN12 878 aa18.1■□□□□ 0.49
UFD1-209ENST00000489406 GDF6Q6KF10 455 aaPredicted RBP18.1■□□□□ 0.49
UFD1-209ENST00000489406 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
UFD1-209ENST00000489406 RIPOR3Q96MK2 946 aa18.1■□□□□ 0.49
UFD1-209ENST00000489406 RNF146Q9NTX7 359 aa18.1■□□□□ 0.49
UFD1-209ENST00000489406 EP300Q09472 2414 aaPredicted RBP18.09■□□□□ 0.49
UFD1-209ENST00000489406 CSPG5O95196 566 aa18.09■□□□□ 0.49
UFD1-209ENST00000489406 CKBP12277 381 aa18.09■□□□□ 0.49
UFD1-209ENST00000489406 NDUFV1P49821 464 aa18.09■□□□□ 0.49
UFD1-209ENST00000489406 MSLNLQ96KJ4 702 aa18.09■□□□□ 0.49
UFD1-209ENST00000489406 PURBQ96QR8 312 aaKnown RBP18.09■□□□□ 0.49
UFD1-209ENST00000489406 YME1L1Q96TA2 773 aa18.09■□□□□ 0.49
UFD1-209ENST00000489406 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
UFD1-209ENST00000489406 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
UFD1-209ENST00000489406 DBNLQ9UJU6 430 aaKnown RBP18.09■□□□□ 0.49
UFD1-209ENST00000489406 PNMA6EA0A0J9YXQ4 647 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 KPNA6O60684 536 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 EYA4O95677 639 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
UFD1-209ENST00000489406 ADAM15Q13444 863 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 TMED8Q6PL24 325 aaPredicted RBP18.08■□□□□ 0.48
UFD1-209ENST00000489406 LCORLQ8N3X6 602 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 TMEM105Q8N8V8 129 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.08■□□□□ 0.48
UFD1-209ENST00000489406 SMC4Q9NTJ3 1288 aa18.08■□□□□ 0.48
UFD1-209ENST00000489406 GRM6O15303 877 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 UPP2O95045 317 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 GNAI3P08754 354 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 ICAM3P32942 547 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 PTPN21Q16825 1174 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 C16orf86Q6ZW13 317 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 TRERF1Q96PN7 1200 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 CCDC8Q9H0W5 538 aaPredicted RBP18.07■□□□□ 0.48
UFD1-209ENST00000489406 ATG2AQ2TAZ0 1938 aa18.07■□□□□ 0.48
UFD1-209ENST00000489406 CFAP47Q6ZTR5 3102 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 A6NJR5 290 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 PRKAB2O43741 272 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 LGR5O75473 907 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 RBL2Q08999 1139 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 OS9Q13438 667 aaPredicted RBP18.06■□□□□ 0.48
UFD1-209ENST00000489406 PUM1Q14671 1186 aaKnown RBP eCLIP18.06■□□□□ 0.48
UFD1-209ENST00000489406 MBTPS1Q14703 1052 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 MORC4Q8TE76 937 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 FEM1BQ9UK73 627 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 MICAL3Q7RTP6 2002 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 ATRXP46100 2492 aa18.06■□□□□ 0.48
UFD1-209ENST00000489406 NLRC5Q86WI3 1866 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 RAD50Q92878 1312 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 ALAS1P13196 640 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 CTNNB1P35222 781 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 SLC9C2Q5TAH2 1124 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 KIAA2013Q8IYS2 634 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 SMRP1Q8NCR6 262 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 COPS5Q92905 334 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 PHF7Q9BWX1 381 aaPredicted RBP18.05■□□□□ 0.48
UFD1-209ENST00000489406 LMAN2LQ9H0V9 348 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 CYP39A1Q9NYL5 469 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 CLEC1BQ9P126 229 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 NOB1Q9ULX3 412 aaKnown RBP18.05■□□□□ 0.48
UFD1-209ENST00000489406 PKD1L2Q7Z442 2459 aa18.05■□□□□ 0.48
UFD1-209ENST00000489406 PDE6AP16499 860 aa18.04■□□□□ 0.48
UFD1-209ENST00000489406 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
UFD1-209ENST00000489406 ZNF618Q5T7W0 954 aa18.04■□□□□ 0.48
UFD1-209ENST00000489406 TRAF7Q6Q0C0 670 aa18.04■□□□□ 0.48
UFD1-209ENST00000489406 ZBTB33Q86T24 672 aa18.04■□□□□ 0.48
UFD1-209ENST00000489406 NYAP2Q9P242 653 aa18.04■□□□□ 0.48
UFD1-209ENST00000489406 USP15Q9Y4E8 981 aaPredicted RBP18.04■□□□□ 0.48
UFD1-209ENST00000489406 ZNF532Q9HCE3 1301 aa18.03■□□□□ 0.48
UFD1-209ENST00000489406 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
UFD1-209ENST00000489406 COL9A2Q14055 689 aaPredicted RBP18.03■□□□□ 0.48
UFD1-209ENST00000489406 ST3GAL2Q16842 350 aa18.03■□□□□ 0.48
UFD1-209ENST00000489406 MUM1L1Q5H9M0 696 aa18.03■□□□□ 0.48
UFD1-209ENST00000489406 NSMFQ6X4W1 530 aa18.03■□□□□ 0.48
UFD1-209ENST00000489406 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
UFD1-209ENST00000489406 CLIP2Q9UDT6 1046 aa18.03■□□□□ 0.48
UFD1-209ENST00000489406 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
UFD1-209ENST00000489406 TKFCQ3LXA3 575 aa18.02■□□□□ 0.48
UFD1-209ENST00000489406 SESTD1Q86VW0 696 aa18.02■□□□□ 0.48
UFD1-209ENST00000489406 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
UFD1-209ENST00000489406 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
UFD1-209ENST00000489406 C11orf84Q9BUA3 381 aaPredicted RBP18.02■□□□□ 0.48
UFD1-209ENST00000489406 API5Q9BZZ5 524 aaKnown RBP18.02■□□□□ 0.48
UFD1-209ENST00000489406 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.47
UFD1-209ENST00000489406 C5orf67F2Z3F1 127 aa18.01■□□□□ 0.47
UFD1-209ENST00000489406 RB1P06400 928 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms