RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 COPS5Q92905 334 aa12.74□□□□□ -0.37
PTP4A2-206ENST00000489313 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
PTP4A2-206ENST00000489313 WDFY4Q6ZS81 3184 aa12.74□□□□□ -0.37
PTP4A2-206ENST00000489313 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 ACTN1P12814 892 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 TAP1Q03518 808 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 PDE4DQ08499 809 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 AAK1Q2M2I8 961 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 RRP12Q5JTH9 1297 aaKnown RBP12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 CLEC4DQ8WXI8 215 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 FTOQ9C0B1 505 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 ANAPC4Q9UJX5 808 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 C5orf42Q9H799 3197 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 ORC4O43929 436 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 POU3F3P20264 500 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 MX1P20591 662 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 RFC2P35250 354 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 PLA2G5P39877 138 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 RNF207Q6ZRF8 634 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 TMEM47Q9BQJ4 181 aa12.73□□□□□ -0.37
PTP4A2-206ENST00000489313 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 LOC102724159A0A0B4J2E5 919 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 A6NJR5 290 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 RBAK-RBAKDNI3L0D1 243 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 RPS6P62753 249 aaKnown RBP12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 PWP2Q15269 919 aaKnown RBP12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 HERC6Q8IVU3 1022 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 RETREG2Q8NC44 543 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 NOD1Q9Y239 953 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
PTP4A2-206ENST00000489313 RAD50Q92878 1312 aa12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 ARIH2O95376 493 aa12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 FGRP09769 529 aa12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 EDNRBP24530 442 aa12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 TMCO2Q7Z6W1 182 aaPredicted RBP12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 FAM122AQ96E09 287 aa12.71□□□□□ -0.37
PTP4A2-206ENST00000489313 NKRFO15226 690 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 PDHBP11177 359 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 GRB10Q13322 594 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 BFSP2Q13515 415 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 ALX1Q15699 326 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 C1QTNF1Q9BXJ1 281 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 EPHX3Q9H6B9 360 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
PTP4A2-206ENST00000489313 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 TLL1O43897 1013 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 KPNA6O60684 536 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 FGAP02671 866 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 HAND2P61296 217 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 PTPN11Q06124 597 aaPredicted RBP12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 PTGISQ16647 500 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 USH1GQ495M9 461 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 COG5Q9UP83 839 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 KIAA1217Q5T5P2 1943 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 SALL3Q9BXA9 1300 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 MYH6P13533 1939 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 A0A0D9SFI3 127 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 LPXNO60711 386 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 KCNJ6P48051 423 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 GPNMBQ14956 572 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 GDF6Q6KF10 455 aaPredicted RBP12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 CHST3Q7LGC8 479 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 DNERQ8NFT8 737 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 AFG1LQ8WV93 481 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 HLA-CQ95604 372 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 CTAGE1Q96RT6 745 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 TCP11L1Q9NUJ3 509 aa12.69□□□□□ -0.38
PTP4A2-206ENST00000489313 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 BAIAP3O94812 1187 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 GOLGA8HP0CJ92 632 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 WDR5P61964 334 aaKnown RBP12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 LY6KQ17RY6 165 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 GDPD5Q8WTR4 605 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 TBC1D5Q92609 795 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 LRFN3Q9BTN0 628 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 HELLSQ9NRZ9 838 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 PNMA2Q9UL42 364 aa12.68□□□□□ -0.38
PTP4A2-206ENST00000489313 MYH7BA7E2Y1 1941 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms