RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RESTQ13127 1097 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 E2F5Q15329 346 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 GNPTABQ3T906 1256 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 KCTD1Q719H9 257 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 NME8Q8N427 588 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 DHTKD1Q96HY7 919 aaPredicted RBP19.2■□□□□ 0.66
NPHP4-209ENST00000489180 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 TMOD1P28289 359 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 NHEJ1Q9H9Q4 299 aaPredicted RBP19.2■□□□□ 0.66
NPHP4-209ENST00000489180 LARSQ9P2J5 1176 aaKnown RBP19.2■□□□□ 0.66
NPHP4-209ENST00000489180 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 SGK1O00141 431 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 SERPINB6P35237 376 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 DIXDC1Q155Q3 683 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 H7C0C1 242 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 CAPN9O14815 690 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 LMNB1P20700 586 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 SLCO1A2P46721 670 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 ATP5OP48047 213 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 ITKQ08881 620 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 SESTD1Q86VW0 696 aa19.2■□□□□ 0.66
NPHP4-209ENST00000489180 MEIS1O00470 390 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 ZBTB8OSQ8IWT0 167 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 LCORLQ8N3X6 602 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.19■□□□□ 0.66
NPHP4-209ENST00000489180 OSBP2Q969R2 916 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 MLH3Q9UHC1 1453 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 SLC16A2P36021 539 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 MRPS25P82663 173 aaKnown RBP19.19■□□□□ 0.66
NPHP4-209ENST00000489180 NIM1KQ8IY84 436 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 RNF169Q8NCN4 708 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 CIAO1O76071 339 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 AFPP02771 609 aaKnown RBP19.19■□□□□ 0.66
NPHP4-209ENST00000489180 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 RCN2Q14257 317 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 LRRC43Q8N309 656 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 PCIF1Q9H4Z3 704 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 SUN1O94901 812 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 SLFN14P0C7P3 912 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 BCAP29Q9UHQ4 241 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 DAAM1Q9Y4D1 1078 aa19.19■□□□□ 0.66
NPHP4-209ENST00000489180 SH2B2O14492 632 aaPredicted RBP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 EIF4A3P38919 411 aaKnown RBP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 FAM133BQ5BKY9 247 aaKnown RBP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 RFX6Q8HWS3 928 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 TBCKQ8TEA7 893 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 TCP11Q8WWU5 503 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 MAGEF1Q9HAY2 307 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 ATP8B1O43520 1251 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 TMEM191BP0C7N4 346 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 ADD2P35612 726 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 CYP27A1Q02318 531 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 SEC31BQ9NQW1 1179 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 PCDHB4Q9Y5E5 795 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 GYS2P54840 703 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 MFAP3P55082 362 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 PPP2R5AQ15172 486 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 ZNF653Q96CK0 615 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 ABCC12Q96J65 1359 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 ZNF804BA4D1E1 1349 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 GFPT2O94808 682 aa19.18■□□□□ 0.66
NPHP4-209ENST00000489180 POLGP54098 1239 aaPredicted RBP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 BZW2Q9Y6E2 419 aaKnown RBP19.18■□□□□ 0.66
NPHP4-209ENST00000489180 IL9RQ01113 521 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 NNTQ13423 1086 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 MAN2A1Q16706 1144 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 LRCH2Q5VUJ6 765 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 FBXO38Q6PIJ6 1188 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 PIGSQ96S52 555 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 M0QZ92 97 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 MYO1FO00160 1098 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 TMED2Q15363 201 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 BBOF1Q8ND07 529 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 KCNG1Q9UIX4 513 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 RWDD2AQ9UIY3 292 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 CD2APQ9Y5K6 639 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 DCLK2Q8N568 766 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 ABCB6Q9NP58 842 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 DISC1Q9NRI5 854 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 PTK2Q05397 1052 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 DHX9Q08211 1270 aaKnown RBP19.17■□□□□ 0.66
NPHP4-209ENST00000489180 CUL4BQ13620 913 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 PAGE5Q96GU1 130 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 SMYD2Q9NRG4 433 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 TBK1Q9UHD2 729 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 CYP2D7A0A087X1C5 515 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 LAD1O00515 517 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 GSTA1P08263 222 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 GSTA2P09210 222 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 ATP2B4P23634 1241 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 TRAPPC10P48553 1259 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 IGBP1P78318 339 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms