RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 AP3B2Q13367 1082 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 KIF4BQ2VIQ3 1234 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 RNF43Q68DV7 783 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 DLK2Q6UY11 383 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 RASAL3Q86YV0 1011 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 C2CD4AQ8NCU7 369 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 KCNQ5Q9NR82 932 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 HYPKQ9NX55 129 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 CHPF2Q9P2E5 772 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 GPN3Q9UHW5 284 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 IRS4O14654 1257 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 LDHBP07195 334 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 ADH5P11766 374 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 AIMP1Q12904 312 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 DTX1Q86Y01 620 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 ZBTB38Q8NAP3 1195 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 CDCA5Q96FF9 252 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 FAM89AQ96GI7 184 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 SRCIN1Q9C0H9 1055 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 GGA3Q9NZ52 723 aa6.59□□□□□ -1.35
R3HDM1-218ENST00000487294 GIPC1O14908 333 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 GSTT1P30711 240 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 RALBP1Q15311 655 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 KRT24Q2M2I5 525 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 HP1BP3Q5SSJ5 553 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 DNAJC14Q6Y2X3 702 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 PDZD3Q86UT5 571 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 CCDC191Q8NCU4 936 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 WDR18Q9BV38 432 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 CCDC86Q9H6F5 360 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 C12orf49Q9H741 205 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 MYOZ2Q9NPC6 264 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 RNF19AQ9NV58 838 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 ACTL7BQ9Y614 415 aa6.58□□□□□ -1.36
R3HDM1-218ENST00000487294 ASTN2O75129 1339 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 XDHP47989 1333 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 MYO3BQ8WXR4 1341 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 UFL1O94874 794 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 PCCAP05165 728 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 GSTP1P09211 210 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 ZNF853P0CG23 659 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 LIG1P18858 919 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 SOX10P56693 466 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 PPP2R3AQ06190 1150 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 COL19A1Q14993 1142 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 CCDC152Q4G0S7 254 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 ANGEL2Q5VTE6 544 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 FBXO46Q6PJ61 603 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 ZNF296Q8WUU4 475 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 NECAB3Q96P71 396 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 RNF114Q9Y508 228 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 HTTP42858 3142 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 ZNF646O15015 1829 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 LAMB1P07942 1786 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 MED23Q9ULK4 1368 aa6.57□□□□□ -1.36
R3HDM1-218ENST00000487294 PRR19A6NJB7 356 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 UNCXA6NJT0 531 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 ZNF862O60290 1169 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 PDE8AO60658 829 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 USP11P51784 963 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 DACT2Q5SW24 774 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 LDLRAD1Q5T700 205 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 DUSP27Q5VZP5 1158 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 EZH1Q92800 747 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 RUNDC1Q96C34 613 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 CHMP4AQ9BY43 222 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 GZF1Q9H116 711 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 PPP1R9AQ9ULJ8 1098 aa6.56□□□□□ -1.36
R3HDM1-218ENST00000487294 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 COL1A1P02452 1464 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 WNT10BO00744 389 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 ENC1O14682 589 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 FBXO24O75426 580 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 USP17L7P0C7H9 530 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 NME2P22392 152 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 ARNTP27540 789 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 INHBEP58166 350 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 SREBF2Q12772 1141 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 NFKBIBQ15653 356 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 MAP3K11Q16584 847 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 DYMQ7RTS9 669 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 NPAS4Q8IUM7 802 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 GCC1Q96CN9 775 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 ZBED3Q96IU2 234 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms