RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	ACVR2B	Q13705	512 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	SNX17	Q15036	470 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	CDC37	Q16543	378 aa	Predicted RBP	11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	CCDC174	Q6PII3	467 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	POTEB	Q6S5H4	581 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	KATNBL1	Q9H079	304 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	UPF3A	Q9H1J1	476 aa	Known RBP	11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	SPC25	Q9HBM1	224 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	HOMER2	Q9NSB8	354 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	LAMA3	Q16787	3333 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	LRRC37A2	A6NM11	1700 aa		11.52	□□□□□ -0.57
KRIT1-223	ENST00000487168	MOXD2P	A6NHM9	499 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	SH2B2	O14492	632 aa	Predicted RBP	11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	PRC1	O43663	620 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	CNGA1	P29973	690 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	IQSEC1	Q6DN90	963 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	RNF207	Q6ZRF8	634 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	DHX32	Q7L7V1	743 aa	Known RBP	11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	RASGRP2	Q7LDG7	609 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	FBXO11	Q86XK2	927 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	CCDC144CP	Q8IYA2	1237 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	CTCFL	Q8NI51	663 aa	Predicted RBP	11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	IWS1	Q96ST2	819 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	JMJD4	Q9H9V9	463 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	XPNPEP3	Q9NQH7	507 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	PHF24	Q9UPV7	400 aa		11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	LAMA2	P24043	3122 aa	Known RBP	11.51	□□□□□ -0.57
KRIT1-223	ENST00000487168	MYH6	P13533	1939 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	PNMA6F	A0A0J9YX94	578 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	RBM47	A0AV96	593 aa	Known RBP	11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	SOWAHB	A6NEL2	793 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	NFIB	O00712	420 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	NKRF	O15226	690 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	ADAMTS4	O75173	837 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	HOXB3	P14651	431 aa	Predicted RBP	11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	HSPA4	P34932	840 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	GJA9	P57773	515 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	RPS6	P62753	249 aa	Known RBP	11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	CNTN2	Q02246	1040 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	BAAT	Q14032	418 aa	Predicted RBP	11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	LRRC41	Q15345	812 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	QRICH1	Q2TAL8	776 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	MUM1L1	Q5H9M0	696 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	TMEM92	Q6UXU6	159 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	ZNF654	Q8IZM8	581 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	PCSK9	Q8NBP7	692 aa	Known RBP	11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	KLHDC9	Q8NEP7	349 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	NUP133	Q8WUM0	1156 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	NEK1	Q96PY6	1258 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	MTMR7	Q9Y216	660 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	TAF6L	Q9Y6J9	622 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	LCT	P09848	1927 aa		11.5	□□□□□ -0.57
KRIT1-223	ENST00000487168	TRIOBP	Q9H2D6	2365 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	MCM3AP	O60318	1980 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	SMCHD1	A6NHR9	2005 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	CCDC69	A6NI79	296 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	CABYR	O75952	493 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	GOLGA8H	P0CJ92	632 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	ALDH5A1	P51649	535 aa	Predicted RBP	11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	HSD17B4	P51659	736 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	EXOSC10	Q01780	885 aa	Known RBP	11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	CCDC144B	Q3MJ40	725 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	NSMF	Q6X4W1	530 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	NSUN6	Q8TEA1	469 aa	Known RBP	11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	DIS3L	Q8TF46	1054 aa	Known RBP	11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	DPF3	Q92784	378 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	UBA5	Q9GZZ9	404 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	RBM28	Q9NW13	759 aa	Known RBP	11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	SLC12A7	Q9Y666	1083 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	ASTN1	O14525	1302 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	ELP1	O95163	1332 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	NID2	Q14112	1375 aa		11.49	□□□□□ -0.57
KRIT1-223	ENST00000487168	CCDC196	A0A1B0GTZ2	297 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	PTPDC1	A2A3K4	754 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	hCG_1984214	I3L0E3	225 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	PIK3CD	O00329	1044 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	DHX16	O60231	1041 aa	Known RBP	11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	PSMA5	P28066	241 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	XRRA1	Q6P2D8	792 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	SYNE3	Q6ZMZ3	975 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	STAG2	Q8N3U4	1231 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	ZNF713	Q8N859	430 aa	Predicted RBP	11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	SCFD2	Q8WU76	684 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	PTCD2	Q8WV60	388 aa	Known RBP	11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	TOX2	Q96NM4	488 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	KRTAP3-3	Q9BYR6	98 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	KRTAP3-2	Q9BYR7	98 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	GNE	Q9Y223	722 aa	Known RBP	11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	PCDHA1	Q9Y5I3	950 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	MROH7	Q68CQ1	1323 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	SYNRG	Q9UMZ2	1314 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	ALPK3	Q96L96	1907 aa		11.48	□□□□□ -0.57
KRIT1-223	ENST00000487168	FRMPD4	Q14CM0	1322 aa		11.47	□□□□□ -0.57
KRIT1-223	ENST00000487168		H0YGN5	161 aa		11.47	□□□□□ -0.57
KRIT1-223	ENST00000487168	CYTH3	O43739	400 aa		11.47	□□□□□ -0.57
KRIT1-223	ENST00000487168	ZEB2	O60315	1214 aa		11.47	□□□□□ -0.57
KRIT1-223	ENST00000487168	KPNA6	O60684	536 aa		11.47	□□□□□ -0.57
KRIT1-223	ENST00000487168	STAM2	O75886	525 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms