RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 DEPDC4Q8N2C3 294 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 ESR2Q92731 530 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 DNAJC25Q9H1X3 360 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 RNF112Q9ULX5 631 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 MINPP1Q9UNW1 487 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 HPSEQ9Y251 543 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 CLIC4Q9Y696 253 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 ECM29Q5VYK3 1845 aa8.13□□□□□ -1.11
SMARCAL1-212ENST00000486983 CASZ1Q86V15 1759 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 CHD4Q14839 1912 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 FAM177BA6PVY3 158 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 NEMFO60524 1076 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 NDUFA8P51970 172 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 SSRP1Q08945 709 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 DHX8Q14562 1220 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 PTPAQ15257 358 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 SAFBQ15424 915 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 RTN1Q16799 776 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 KIAA1524Q8TCG1 905 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 SETDB2Q96T68 719 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 MAP3K14Q99558 947 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 RNF26Q9BY78 433 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 FOXP1Q9H334 677 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 DNAJB12Q9NXW2 375 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 KIAA1024Q9UPX6 916 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 BTAF1O14981 1849 aa8.12□□□□□ -1.11
SMARCAL1-212ENST00000486983 MYO5AQ9Y4I1 1855 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 IRS2Q9Y4H2 1338 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 SNAP23O00161 211 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 PRKAB2O43741 272 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 MYO1BO43795 1136 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 ORC4O43929 436 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 CUTAO60888 179 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 DDAH1O94760 285 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 MMP1P03956 469 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 CALM1P0DP23 149 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 CALM2P0DP24 149 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 CALM3P0DP25 149 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 PFKFB1P16118 471 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 RPS8P62241 208 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 SF3B2Q13435 895 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 GNL2Q13823 731 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 NOLC1Q14978 699 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 SEC23AQ15436 765 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 RILPL1Q5EBL4 403 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 TBC1D9BQ66K14 1250 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 OTUD7BQ6GQQ9 843 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 C11orf57Q6ZUT1 292 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 ZNF654Q8IZM8 581 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 TPCN2Q8NHX9 752 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 FAM84BQ96KN1 310 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 UBAC1Q9BSL1 405 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 KCNF1Q9H3M0 494 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 ATP8A2Q9NTI2 1148 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 RAI14Q9P0K7 980 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 TUBE1Q9UJT0 475 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 TACC3Q9Y6A5 838 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 DLEC1Q9Y238 1755 aa8.11□□□□□ -1.11
SMARCAL1-212ENST00000486983 LAMB1P07942 1786 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 MROH7-TTC4A0A0A0MT08 1334 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 TNKSO95271 1327 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 A0A1B0GVL5 298 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 BECN2A8MW95 431 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 IKBKBO14920 756 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 SLC3A2P08195 630 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 XBP1P17861 261 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 GYG1P46976 350 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 ZRSR1Q15695 479 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 RESP18Q5W5W9 173 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 SPTY2D1Q68D10 685 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 C15orf52Q6ZUT6 534 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 ADGRA1Q86SQ6 560 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 RAB11FIP4Q86YS3 637 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 CERS3Q8IU89 383 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 DHX40Q8IX18 779 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 CRACR2BQ8N4Y2 399 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 MIGA1Q8NAN2 632 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 FANCBQ8NB91 859 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 WFDC12Q8WWY7 111 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 CELF1Q92879 486 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 PHKBQ93100 1093 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 NSUN4Q96CB9 384 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 SDF4Q9BRK5 362 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 SLC26A6Q9BXS9 759 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 TRIM5Q9C035 493 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 TTC12Q9H892 705 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 ARPP21Q9UBL0 812 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 ABCF2Q9UG63 623 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 CEP131Q9UPN4 1083 aa8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCAL1-212ENST00000486983 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms