RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 CYBAP13498 195 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
LINC00996-202ENST00000486954 CNGA1P29973 690 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 CACNB2Q08289 660 aaPredicted RBP13.39□□□□□ -0.27
LINC00996-202ENST00000486954 ST3GAL1Q11201 340 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 TRIM32Q13049 653 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 AP3B2Q13367 1082 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 MAP3K21Q5TCX8 1036 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 FGD4Q96M96 766 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
LINC00996-202ENST00000486954 TAAR1Q96RJ0 339 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 ALG1Q9BT22 464 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00996-202ENST00000486954 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 ABHD16BQ9H3Z7 469 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 BRMS1Q9HCU9 246 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 PXMP2Q9NR77 195 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
LINC00996-202ENST00000486954 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
LINC00996-202ENST00000486954 MCM3APO60318 1980 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 MEIS2O14770 477 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 JAK2O60674 1132 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 FOSP01100 380 aaPredicted RBP13.38□□□□□ -0.27
LINC00996-202ENST00000486954 CCL5P13501 91 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 AKR1A1P14550 325 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 CCND2P30279 289 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 UBE2SQ16763 222 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
LINC00996-202ENST00000486954 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 COL20A1Q9P218 1284 aa13.38□□□□□ -0.27
LINC00996-202ENST00000486954 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
LINC00996-202ENST00000486954 MYCLP12524 364 aaPredicted RBP13.37□□□□□ -0.27
LINC00996-202ENST00000486954 EDNRBP24530 442 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
LINC00996-202ENST00000486954 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 PGM5Q15124 567 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 MTFR1Q15390 333 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 STXBP2Q15833 593 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 GALNT17Q6IS24 598 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
LINC00996-202ENST00000486954 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 PDCD2LQ9BRP1 358 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 ANO3Q9BYT9 981 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 ASTN1O14525 1302 aa13.37□□□□□ -0.27
LINC00996-202ENST00000486954 SEPT4O43236 478 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 SNAI1O95863 264 aaPredicted RBP13.36□□□□□ -0.27
LINC00996-202ENST00000486954 NR3C2P08235 984 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 SNX21Q969T3 373 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 C8orf76Q96K31 380 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
LINC00996-202ENST00000486954 FAM184BQ9ULE4 1060 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 PCDHA4Q9UN74 947 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
LINC00996-202ENST00000486954 STAM2O75886 525 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 IGHA2P01877 340 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 HSP90AA1P07900 732 aaKnown RBP13.35□□□□□ -0.27
LINC00996-202ENST00000486954 GJB1P08034 283 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 ZNF865P0CJ78 1059 aaPredicted RBP13.35□□□□□ -0.27
LINC00996-202ENST00000486954 RARBP10826 455 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 FDPSP14324 419 aaKnown RBP13.35□□□□□ -0.27
LINC00996-202ENST00000486954 CAPN2P17655 700 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 FOSBP53539 338 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 SAFBQ15424 915 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00996-202ENST00000486954 GNPTABQ3T906 1256 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 BLIDQ8IZY5 108 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 DEFB118Q96PH6 123 aa13.35□□□□□ -0.27
LINC00996-202ENST00000486954 PAK6Q9NQU5 681 aaPredicted RBP13.35□□□□□ -0.27
LINC00996-202ENST00000486954 DTNBO60941 627 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
LINC00996-202ENST00000486954 KRT2P35908 639 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
LINC00996-202ENST00000486954 TTLL4Q14679 1199 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 TRPV1Q8NER1 839 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
LINC00996-202ENST00000486954 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 PGBD1Q96JS3 809 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 PHF20Q9BVI0 1012 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 TMEM260Q9NX78 707 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 KCNJ14Q9UNX9 436 aa13.34□□□□□ -0.27
LINC00996-202ENST00000486954 CCDC194A0A1B0GVG4 234 aa13.33□□□□□ -0.28
LINC00996-202ENST00000486954 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms