RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
SDCCAG3-211ENST00000486441 KHSRPQ92945 711 aaKnown RBP eCLIP16.84■□□□□ 0.29
SDCCAG3-211ENST00000486441 FRMPD2Q68DX3 1309 aaPredicted RBP16.84■□□□□ 0.29
SDCCAG3-211ENST00000486441 PTPDC1A2A3K4 754 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 CALML3P27482 149 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 RFC2P35250 354 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 PLA2G5P39877 138 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 KAT2BQ92831 832 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 SLC9A7Q96T83 725 aa16.83■□□□□ 0.28
SDCCAG3-211ENST00000486441 PTPRSQ13332 1948 aa16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 LCHNA4D1U4 455 aa16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 MX1P20591 662 aa16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 PTPN11Q06124 597 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 GRB10Q13322 594 aa16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 TMCO2Q7Z6W1 182 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 DHX38Q92620 1227 aaKnown RBP16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
SDCCAG3-211ENST00000486441 NKRFO15226 690 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 ZNF543Q08ER8 600 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 FAM47CQ5HY64 1035 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 RGS22Q8NE09 1264 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 DNERQ8NFT8 737 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 SCFD2Q8WU76 684 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 ARNTL2Q8WYA1 636 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 CPVLQ9H3G5 476 aa16.81■□□□□ 0.28
SDCCAG3-211ENST00000486441 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 KPNA6O60684 536 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 ACTN1P12814 892 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 PDE4DQ08499 809 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 PPP2R5BQ15173 497 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 GDF6Q6KF10 455 aaPredicted RBP16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 LRFN3Q9BTN0 628 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 CD320Q9NPF0 282 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 C11orf16Q9NQ32 467 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 HELLSQ9NRZ9 838 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 COL20A1Q9P218 1284 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 COG5Q9UP83 839 aa16.8■□□□□ 0.28
SDCCAG3-211ENST00000486441 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 AAK1Q2M2I8 961 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 SESTD1Q86VW0 696 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 RETREG2Q8NC44 543 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 TTC14Q96N46 770 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 C1QTNF1Q9BXJ1 281 aa16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
SDCCAG3-211ENST00000486441 TANC1Q9C0D5 1861 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 GTPBP6O43824 516 aaPredicted RBP16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 NBNO60934 754 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 BAIAP3O94812 1187 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 CXCL10P02778 98 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 DEFB103AP81534 67 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 RBL2Q08999 1139 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 BFSP2Q13515 415 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 SKIV2LQ15477 1246 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 PTGISQ16647 500 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 RRP12Q5JTH9 1297 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 TAAR1Q96RJ0 339 aa16.78■□□□□ 0.28
SDCCAG3-211ENST00000486441 MYO7AQ13402 2215 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 TRIOO75962 3097 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 MMP3P08254 477 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 HAND2P61296 217 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 HIC1Q14526 733 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 MBTPS1Q14703 1052 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 LY6KQ17RY6 165 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 TRIM71Q2Q1W2 868 aaKnown RBP16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 SYTL5Q8TDW5 730 aaPredicted RBP16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 WNT8BQ93098 351 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 HLA-CQ95604 372 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 UBA5Q9GZZ9 404 aa16.77■□□□□ 0.28
SDCCAG3-211ENST00000486441 PDE1AP54750 535 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 BRDTQ58F21 947 aaPredicted RBP16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 CAGE1Q8TC20 777 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 AFAP1L1Q8TED9 768 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 FAM122AQ96E09 287 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 SUGCTQ9HAC7 445 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 TOMM22Q9NS69 142 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
SDCCAG3-211ENST00000486441 ZMYM6O95789 1325 aa16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 KIF28PB7ZC32 967 aa16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 SELPP16109 830 aa16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
SDCCAG3-211ENST00000486441 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms